RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 CARNS1A5YM72 827 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 LRRIQ4A6NIV6 560 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 PP2D1A8MPX8 630 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 H3BQV1 296 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 FSCN2O14926 492 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 ASAP2O43150 1006 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 B4GALT3O60512 393 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 GLP2RO95838 553 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 SKIP12755 728 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
RPA1-206ENST00000573994 CA8P35219 290 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 PPM1AP35813 382 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 CCT6AP40227 531 aaKnown RBP11.08□□□□□ -0.64
RPA1-206ENST00000573994 MCM2P49736 904 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 AFF1P51825 1210 aaKnown RBP11.08□□□□□ -0.64
RPA1-206ENST00000573994 BCAR1P56945 870 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 UBE3AQ05086 875 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 PTGDRQ13258 359 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 PCBP1Q15365 356 aaKnown RBP eCLIP11.08□□□□□ -0.64
RPA1-206ENST00000573994 ECM1Q16610 540 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 AMHR2Q16671 573 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 NOMO2Q5JPE7 1267 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 HAUS3Q68CZ6 603 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 AGMOQ6ZNB7 445 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 CDR2LQ86X02 465 aaPredicted RBP11.08□□□□□ -0.64
RPA1-206ENST00000573994 SLC39A11Q8N1S5 342 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 SNX29Q8TEQ0 813 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 MRPS27Q92552 414 aaKnown RBP11.08□□□□□ -0.64
RPA1-206ENST00000573994 NACC1Q96RE7 527 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 TCF25Q9BQ70 676 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 TRAIPQ9BWF2 469 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 APOL6Q9BWW8 343 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 TLE6Q9H808 572 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 CD320Q9NPF0 282 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 TBC1D13Q9NVG8 400 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 SPG21Q9NZD8 308 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 LRWD1Q9UFC0 647 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 SMC3Q9UQE7 1217 aa11.08□□□□□ -0.64
RPA1-206ENST00000573994 HIDE1A8MVS5 230 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 OFD1O75665 1012 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 LIG1P18858 919 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 RPA1P27694 616 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 SSTR3P32745 418 aaPredicted RBP11.07□□□□□ -0.64
RPA1-206ENST00000573994 PLCB3Q01970 1234 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 RNASELQ05823 741 aaKnown RBP11.07□□□□□ -0.64
RPA1-206ENST00000573994 PUS10Q3MIT2 529 aaKnown RBP11.07□□□□□ -0.64
RPA1-206ENST00000573994 LLGL2Q6P1M3 1020 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 NOTUMQ6P988 496 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 PADI6Q6TGC4 694 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 EFHBQ8N7U6 833 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 SMG8Q8ND04 991 aaKnown RBP11.07□□□□□ -0.64
RPA1-206ENST00000573994 MCPH1Q8NEM0 835 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 VN1R2Q8NFZ6 395 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 BCL7CQ8WUZ0 217 aaPredicted RBP11.07□□□□□ -0.64
RPA1-206ENST00000573994 BSNDQ8WZ55 320 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 PGBD4Q96DM1 585 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 KIFC3Q9BVG8 833 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 NXF3Q9H4D5 531 aaKnown RBP11.07□□□□□ -0.64
RPA1-206ENST00000573994 RSAD1Q9HA92 442 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 POLD4Q9HCU8 107 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 DNAJB4Q9UDY4 337 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 DAXXQ9UER7 740 aaPredicted RBP11.07□□□□□ -0.64
RPA1-206ENST00000573994 CD207Q9UJ71 328 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 DBR1Q9UK59 544 aaKnown RBP11.07□□□□□ -0.64
RPA1-206ENST00000573994 LZTS1Q9Y250 596 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 HES2Q9Y543 173 aa11.07□□□□□ -0.64
RPA1-206ENST00000573994 PLXNA4Q9HCM2 1894 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 ZNF623O75123 536 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 NPTXRO95502 500 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 POMCP01189 267 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 ARF4P18085 180 aaPredicted RBP11.06□□□□□ -0.64
RPA1-206ENST00000573994 CDC25AP30304 524 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 MLH1P40692 756 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 SLC11A1P49279 550 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 ALDH7A1P49419 539 aaKnown RBP11.06□□□□□ -0.64
RPA1-206ENST00000573994 ADAM15Q13444 863 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 SMAD4Q13485 552 aaKnown RBP11.06□□□□□ -0.64
RPA1-206ENST00000573994 ZRSR1Q15695 479 aaKnown RBP11.06□□□□□ -0.64
RPA1-206ENST00000573994 IL17AQ16552 155 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 DUSP6Q16828 381 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 NYAP1Q6ZVC0 841 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 TMC7Q7Z402 723 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 ZNF280BQ86YH2 543 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 FAM178BQ8IXR5 827 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 URGCPQ8TCY9 931 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 AUTS2Q8WXX7 1259 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 TMEM169Q96HH4 297 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 BHMT2Q9H2M3 363 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 NRDE2Q9H7Z3 1164 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.06□□□□□ -0.64
RPA1-206ENST00000573994 DDX19AQ9NUU7 478 aaKnown RBP11.06□□□□□ -0.64
RPA1-206ENST00000573994 CLEC1BQ9P126 229 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 KIAA1468Q9P260 1216 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 PUF60Q9UHX1 559 aaKnown RBP11.06□□□□□ -0.64
RPA1-206ENST00000573994 KIAA1024Q9UPX6 916 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 IPPQ9Y573 584 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 C5orf42Q9H799 3197 aa11.06□□□□□ -0.64
RPA1-206ENST00000573994 FSD2A1L4K1 749 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 MBTPS2O43462 519 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms