RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 GJD3Q8N144 294 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 PDILTQ8N807 584 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 MICAL1Q8TDZ2 1067 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 PSPC1Q8WXF1 523 aaKnown RBP13.09□□□□□ -0.31
NDE1-206ENST00000572967 LARP4BQ92615 738 aaKnown RBP13.09□□□□□ -0.31
NDE1-206ENST00000572967 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
NDE1-206ENST00000572967 ZNF558Q96NG5 402 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 MTRQ99707 1265 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 TNMDQ9H2S6 317 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 DHX33Q9H6R0 707 aaKnown RBP13.09□□□□□ -0.31
NDE1-206ENST00000572967 ANKEF1Q9NU02 776 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 DBR1Q9UK59 544 aaKnown RBP13.09□□□□□ -0.31
NDE1-206ENST00000572967 FAM50BQ9Y247 325 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 INPP5FQ9Y2H2 1132 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 A0A0U1RQF3 1178 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 MEIS3P2A8K0S8 358 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 PER2O15055 1255 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 NCK2O43639 380 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.32
NDE1-206ENST00000572967 SLITRK3O94933 977 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 ZNF202O95125 648 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 EYA4O95677 639 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 SPATA31C1P0DKV0 1188 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 CDC25AP30304 524 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 CA8P35219 290 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 RFC5P40937 340 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 PHKA2P46019 1235 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 ERVFC1P60507 584 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 UBE3AQ05086 875 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 ZP2Q05996 745 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 POTEGQ6S5H5 508 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 KCNT2Q6UVM3 1135 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 FAM43BQ6ZT52 329 aaPredicted RBP13.08□□□□□ -0.32
NDE1-206ENST00000572967 SV2BQ7L1I2 683 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
NDE1-206ENST00000572967 ELOA2Q8IYF1 753 aaPredicted RBP13.08□□□□□ -0.32
NDE1-206ENST00000572967 FMR1NBQ8N0W7 255 aaPredicted RBP13.08□□□□□ -0.32
NDE1-206ENST00000572967 EFHBQ8N7U6 833 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 RAD54LQ92698 747 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 TCF25Q9BQ70 676 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 ANP32EQ9BTT0 268 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 MMTAG2Q9BU76 263 aaKnown RBP13.08□□□□□ -0.32
NDE1-206ENST00000572967 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 C1QTNF1Q9BXJ1 281 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 MRPL9Q9BYD2 267 aaKnown RBP13.08□□□□□ -0.32
NDE1-206ENST00000572967 GTPBP4Q9BZE4 634 aaKnown RBP13.08□□□□□ -0.32
NDE1-206ENST00000572967 IFT122Q9HBG6 1241 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 AGPAT5Q9NUQ2 364 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 FAM105AQ9NUU6 356 aa13.08□□□□□ -0.32
NDE1-206ENST00000572967 NT5C1B-RDH14C9J2C7 533 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 FSCN2O14926 492 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 GAS2O43903 313 aaKnown RBP13.07□□□□□ -0.32
NDE1-206ENST00000572967 SMC2O95347 1197 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 SSBP05455 408 aaKnown RBP eCLIP13.07□□□□□ -0.32
NDE1-206ENST00000572967 KRT18P05783 430 aaKnown RBP13.07□□□□□ -0.32
NDE1-206ENST00000572967 SRGAP2CP0DJJ0 459 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 PPM1AP35813 382 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 LAMTOR4Q0VGL1 99 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 ADAM15Q13444 863 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 KRBA2Q6ZNG9 492 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 USP49Q70CQ1 688 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 RNF149Q8NC42 400 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 VN1R2Q8NFZ6 395 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 PNMA5Q96PV4 448 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 INO80BQ9C086 356 aaPredicted RBP13.07□□□□□ -0.32
NDE1-206ENST00000572967 NUP62CLQ9H1M0 184 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 GOLPH3LQ9H4A5 285 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 TLE6Q9H808 572 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 MINDY3Q9H8M7 445 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 XPNPEP1Q9NQW7 623 aa13.07□□□□□ -0.32
NDE1-206ENST00000572967 USO1O60763 962 aaKnown RBP13.06□□□□□ -0.32
NDE1-206ENST00000572967 PLA2G4BP0C869 781 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 LIG1P18858 919 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 RAB27AP51159 221 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 CDC42EP1Q00587 391 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 SMAD2Q15796 467 aaKnown RBP13.06□□□□□ -0.32
NDE1-206ENST00000572967 E2F4Q16254 413 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 DUSP6Q16828 381 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 CCDC183Q5T5S1 534 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 LLGL2Q6P1M3 1020 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 TMEM173Q86WV6 379 aaPredicted RBP13.06□□□□□ -0.32
NDE1-206ENST00000572967 ADHFE1Q8IWW8 467 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 SLC39A11Q8N1S5 342 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 SMRP1Q8NCR6 262 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 MCPH1Q8NEM0 835 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 ENGASEQ8NFI3 743 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 TCP11Q8WWU5 503 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 PRPF31Q8WWY3 499 aaKnown RBP13.06□□□□□ -0.32
NDE1-206ENST00000572967 MSLNLQ96KJ4 702 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 GBP3Q9H0R5 595 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 C11orf16Q9NQ32 467 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 CHST12Q9NRB3 414 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 CLEC1BQ9P126 229 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 KCNG1Q9UIX4 513 aa13.06□□□□□ -0.32
NDE1-206ENST00000572967 A0A087WWV3 80 aa13.05□□□□□ -0.32
NDE1-206ENST00000572967 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
NDE1-206ENST00000572967 ACTN4O43707 911 aaKnown RBP13.05□□□□□ -0.32
NDE1-206ENST00000572967 TBCAO75347 108 aaKnown RBP13.05□□□□□ -0.32
NDE1-206ENST00000572967 NR1I2O75469 434 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms