RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 LRWD1Q9UFC0 647 aa23.05■■□□□ 1.28
CHRNB1-204ENST00000572857 KIF3AQ9Y496 699 aa23.05■■□□□ 1.28
CHRNB1-204ENST00000572857 CLASP2O75122 1294 aaKnown RBP23.04■■□□□ 1.28
CHRNB1-204ENST00000572857 FXR2P51116 673 aaKnown RBP eCLIP23.04■■□□□ 1.28
CHRNB1-204ENST00000572857 PTGDRQ13258 359 aa23.04■■□□□ 1.28
CHRNB1-204ENST00000572857 HAUS3Q68CZ6 603 aa23.04■■□□□ 1.28
CHRNB1-204ENST00000572857 FAN1Q9Y2M0 1017 aa23.04■■□□□ 1.28
CHRNB1-204ENST00000572857 HCFC2Q9Y5Z7 792 aa23.04■■□□□ 1.28
CHRNB1-204ENST00000572857 ARL5CA6NH57 179 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 CD2BP2O95400 341 aaKnown RBP23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 NPTXRO95502 500 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 CYP11B2P19099 503 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 MLH1P40692 756 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 ECM1Q16610 540 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 SYCE2Q6PIF2 218 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 RNF135Q8IUD6 432 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 CASP10Q92851 521 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 RPGRIP1Q96KN7 1286 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 S1PR5Q9H228 398 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 NXF3Q9H4D5 531 aaKnown RBP23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 POLD4Q9HCU8 107 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 KIAA1024Q9UPX6 916 aa23.03■■□□□ 1.28
CHRNB1-204ENST00000572857 NRP1O14786 923 aa23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 SSBP05455 408 aaKnown RBP eCLIP23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 CTSAP10619 480 aa23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 LIG1P18858 919 aa23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 ZBTB8OSQ8IWT0 167 aa23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 HACE1Q8IYU2 909 aa23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 BSNDQ8WZ55 320 aa23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 ZFP42Q96MM3 310 aa23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 TMEM175Q9BSA9 504 aa23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 PHF7Q9BWX1 381 aaPredicted RBP23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 VN1R3Q9BXE9 311 aa23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 MUTYHQ9UIF7 546 aa23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 PRG3Q9Y2Y8 225 aaPredicted RBP23.02■■□□□ 1.28
CHRNB1-204ENST00000572857 A0A1B0GUA9 196 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 HOXB8P17481 243 aaPredicted RBP23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 AKAP5P24588 427 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 OR1G1P47890 313 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 SCNN1GP51170 649 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 PDIA5Q14554 519 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 TMEM132AQ24JP5 1023 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 SLC27A1Q6PCB7 646 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 SNX29Q8TEQ0 813 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 SUSD6Q92537 303 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 RAB34Q9BZG1 259 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 BHMT2Q9H2M3 363 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 PRMT7Q9NVM4 692 aaPredicted RBP23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 MIOSQ9NXC5 875 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 PARP2Q9UGN5 583 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 ARID2Q68CP9 1835 aa23.01■■□□□ 1.27
CHRNB1-204ENST00000572857 H3BQV1 296 aa23■■□□□ 1.27
CHRNB1-204ENST00000572857 MUTP22033 750 aa23■■□□□ 1.27
CHRNB1-204ENST00000572857 GJB2P29033 226 aa23■■□□□ 1.27
CHRNB1-204ENST00000572857 GIT2Q14161 759 aa23■■□□□ 1.27
CHRNB1-204ENST00000572857 CBX2Q14781 532 aaPredicted RBP23■■□□□ 1.27
CHRNB1-204ENST00000572857 TPRNQ4KMQ1 711 aa23■■□□□ 1.27
CHRNB1-204ENST00000572857 DEPTORQ8TB45 409 aa23■■□□□ 1.27
CHRNB1-204ENST00000572857 DDX19AQ9NUU7 478 aaKnown RBP23■■□□□ 1.27
CHRNB1-204ENST00000572857 KLK14Q9P0G3 267 aa23■■□□□ 1.27
CHRNB1-204ENST00000572857 USP20Q9Y2K6 914 aa23■■□□□ 1.27
CHRNB1-204ENST00000572857 GIT1Q9Y2X7 761 aa23■■□□□ 1.27
CHRNB1-204ENST00000572857 PP2D1A8MPX8 630 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 LOC730098B7Z3J9 87 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 CDC25AP30304 524 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 CDCA2Q69YH5 1023 aaPredicted RBP22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 PPP4R3CPQ6ZMV5 832 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 COLGALT2Q8IYK4 626 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 IGSF22Q8N9C0 903 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 C2orf40Q9H1Z8 148 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 FZD8Q9H461 694 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 CDH22Q9UJ99 828 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 IRAK3Q9Y616 596 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 STK24Q9Y6E0 443 aa22.99■■□□□ 1.27
CHRNB1-204ENST00000572857 C5orf42Q9H799 3197 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 TTLL13PA6NNM8 815 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 INPPL1O15357 1258 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 EPCAMP16422 314 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 PRPF4BQ13523 1007 aaKnown RBP22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 PPP2R5AQ15172 486 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 PTPN14Q15678 1187 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 IL17AQ16552 155 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 MAPK6Q16659 721 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 KRT79Q5XKE5 535 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 DTHD1Q6ZMT9 781 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 C12orf76Q8N812 135 aaPredicted RBP22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 IFT74Q96LB3 600 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 PRIMPOLQ96LW4 560 aa22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.98■■□□□ 1.27
CHRNB1-204ENST00000572857 PRR33A8MZF0 331 aa22.97■■□□□ 1.27
CHRNB1-204ENST00000572857 LAD1O00515 517 aa22.97■■□□□ 1.27
CHRNB1-204ENST00000572857 C2CD2LO14523 706 aa22.97■■□□□ 1.27
CHRNB1-204ENST00000572857 NR1I2O75469 434 aa22.97■■□□□ 1.27
CHRNB1-204ENST00000572857 PRKCBP05771 671 aa22.97■■□□□ 1.27
CHRNB1-204ENST00000572857 SP100P23497 879 aaPredicted RBP22.97■■□□□ 1.27
CHRNB1-204ENST00000572857 NAMPTP43490 491 aa22.97■■□□□ 1.27
CHRNB1-204ENST00000572857 ZRSR1Q15695 479 aaKnown RBP22.97■■□□□ 1.27
CHRNB1-204ENST00000572857 FAM187BQ17R55 369 aa22.97■■□□□ 1.27
CHRNB1-204ENST00000572857 HERC4Q5GLZ8 1057 aaPredicted RBP22.97■■□□□ 1.27
CHRNB1-204ENST00000572857 CES5AQ6NT32 575 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms