RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 SIX1Q15475 284 aaPredicted RBP18.04■□□□□ 0.48
LITAF-209ENST00000571688 INTS5Q6P9B9 1019 aaKnown RBP18.04■□□□□ 0.48
LITAF-209ENST00000571688 MIGA2Q7L4E1 593 aa18.04■□□□□ 0.48
LITAF-209ENST00000571688 SFR1Q86XK3 245 aa18.04■□□□□ 0.48
LITAF-209ENST00000571688 FAM136AQ96C01 138 aa18.04■□□□□ 0.48
LITAF-209ENST00000571688 BORCS6Q96GS4 357 aa18.04■□□□□ 0.48
LITAF-209ENST00000571688 PITPNM3Q9BZ71 974 aa18.04■□□□□ 0.48
LITAF-209ENST00000571688 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
LITAF-209ENST00000571688 HAO1Q9UJM8 370 aa18.04■□□□□ 0.48
LITAF-209ENST00000571688 DNAJC12Q9UKB3 198 aa18.04■□□□□ 0.48
LITAF-209ENST00000571688 TCRBV7S2A1N4TA0A589 114 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 TNFAIP3P21580 790 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 RPL13P26373 211 aaKnown RBP18.03■□□□□ 0.48
LITAF-209ENST00000571688 RXRBP28702 533 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 UBE2SQ16763 222 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 BMT2Q1RMZ1 405 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 PPP1R15BQ5SWA1 713 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 RHBDF2Q6PJF5 856 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 SLC7A6OSQ96CW6 309 aaPredicted RBP18.03■□□□□ 0.48
LITAF-209ENST00000571688 IFT43Q96FT9 208 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 TBC1D10AQ9BXI6 508 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 WHRNQ9P202 907 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 LGALS13Q9UHV8 139 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 STARD13Q9Y3M8 1113 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 MED24O75448 989 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 TCEAL1Q15170 157 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 SF3B3Q15393 1217 aaKnown RBP18.03■□□□□ 0.48
LITAF-209ENST00000571688 C12orf50Q8NA57 414 aaPredicted RBP18.03■□□□□ 0.48
LITAF-209ENST00000571688 SUPT20HQ8NEM7 779 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 NKIRAS1Q9NYS0 192 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 RPL26L1Q9UNX3 145 aaKnown RBP18.03■□□□□ 0.48
LITAF-209ENST00000571688 USP20Q9Y2K6 914 aa18.03■□□□□ 0.48
LITAF-209ENST00000571688 TTC4O95801 387 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 MYBL1P10243 752 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 RFC4P35249 363 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 KCNJ1P48048 391 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 IRGCQ6NXR0 463 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 PPP1R21Q6ZMI0 780 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 LONP2Q86WA8 852 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 CYP4X1Q8N118 509 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 RBBP8NLQ8NC74 664 aaPredicted RBP18.02■□□□□ 0.48
LITAF-209ENST00000571688 KIAA1683Q9H0B3 1180 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 USH1CQ9Y6N9 552 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 MROH7Q68CQ1 1323 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 TULP1O00294 542 aaPredicted RBP18.02■□□□□ 0.48
LITAF-209ENST00000571688 T-ENOLP0DO92 83 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 CHKAP35790 457 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 GRIPAP1Q4V328 841 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 SPTY2D1Q68D10 685 aaPredicted RBP18.02■□□□□ 0.48
LITAF-209ENST00000571688 OR52E8Q6IFG1 317 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 SLC13A5Q86YT5 568 aaPredicted RBP18.02■□□□□ 0.48
LITAF-209ENST00000571688 DRAXINQ8NBI3 349 aaPredicted RBP18.02■□□□□ 0.48
LITAF-209ENST00000571688 TGFBRAP1Q8WUH2 860 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 ZNF287Q9HBT7 754 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 MTUS1Q9ULD2 1270 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 JAG2Q9Y219 1238 aa18.02■□□□□ 0.48
LITAF-209ENST00000571688 FAM170AA1A519 330 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 ECEL1O95672 775 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 PYGMP11217 842 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 NOVP48745 357 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 CDK8P49336 464 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 MOGSQ13724 837 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 PPP1R18Q6NYC8 613 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 FAM47EQ6ZV65 393 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 TTC8Q8TAM2 541 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 CELF1Q92879 486 aaKnown RBP18.02■□□□□ 0.47
LITAF-209ENST00000571688 CEP95Q96GE4 821 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 ZNF333Q96JL9 665 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 LRRC37BQ96QE4 947 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 REEP2Q9BRK0 252 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 CCDC87Q9NVE4 849 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 PCDHB13Q9Y5F0 798 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 ACTL7BQ9Y614 415 aa18.02■□□□□ 0.47
LITAF-209ENST00000571688 CDK5RAP2Q96SN8 1893 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 TRAFD1O14545 582 aaPredicted RBP18.01■□□□□ 0.47
LITAF-209ENST00000571688 MAGEB2O15479 319 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 EPHB2P29323 1055 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 RFC5P40937 340 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 POTEGQ6S5H5 508 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 C16orf86Q6ZW13 317 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 CFAP61Q8NHU2 1237 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 SLCO2A1Q92959 643 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 CD101Q93033 1021 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 POP1Q99575 1024 aaKnown RBP18.01■□□□□ 0.47
LITAF-209ENST00000571688 SEPT11Q9NVA2 429 aaKnown RBP18.01■□□□□ 0.47
LITAF-209ENST00000571688 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.01■□□□□ 0.47
LITAF-209ENST00000571688 DLGAP2Q9P1A6 1054 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 CTTNBP2NLQ9P2B4 639 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 SAP30BPQ9UHR5 308 aaKnown RBP18.01■□□□□ 0.47
LITAF-209ENST00000571688 FRMPD2Q68DX3 1309 aaPredicted RBP18.01■□□□□ 0.47
LITAF-209ENST00000571688 DOT1LQ8TEK3 1739 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 H0Y3Z8 333 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 CLIC2O15247 247 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 MAPK13O15264 365 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 CETPP11597 493 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 COMTP21964 271 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 EVA1CP58658 441 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 KIF22Q14807 665 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 WNT8AQ9H1J5 351 aa18.01■□□□□ 0.47
LITAF-209ENST00000571688 VCXQ9H320 206 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms