RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 BCL7CQ8WUZ0 217 aaPredicted RBP33.58■■■□□ 2.97
CTDNEP1-206ENST00000571409 FAM193BQ96PV7 902 aaPredicted RBP33.58■■■□□ 2.97
CTDNEP1-206ENST00000571409 PRMT7Q9NVM4 692 aaPredicted RBP33.58■■■□□ 2.97
CTDNEP1-206ENST00000571409 C2orf71A6NGG8 1288 aa33.57■■■□□ 2.96
CTDNEP1-206ENST00000571409 KRT79Q5XKE5 535 aa33.57■■■□□ 2.96
CTDNEP1-206ENST00000571409 SLC27A1Q6PCB7 646 aa33.57■■■□□ 2.96
CTDNEP1-206ENST00000571409 PPP4R3CPQ6ZMV5 832 aa33.57■■■□□ 2.96
CTDNEP1-206ENST00000571409 MRPL43Q8N983 215 aaKnown RBP33.57■■■□□ 2.96
CTDNEP1-206ENST00000571409 PRIMPOLQ96LW4 560 aa33.57■■■□□ 2.96
CTDNEP1-206ENST00000571409 APOL6Q9BWW8 343 aa33.57■■■□□ 2.96
CTDNEP1-206ENST00000571409 C2orf40Q9H1Z8 148 aa33.57■■■□□ 2.96
CTDNEP1-206ENST00000571409 SRGAP2BP0DMP2 458 aa33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 MLH1P40692 756 aa33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 NAMPTP43490 491 aa33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 KCNC3Q14003 757 aa33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 BMS1Q14692 1282 aaKnown RBP33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 LLGL2Q6P1M3 1020 aa33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 DDX53Q86TM3 631 aaKnown RBP33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 HACE1Q8IYU2 909 aa33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 GAD1Q99259 594 aa33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 C1QTNF1Q9BXJ1 281 aa33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 ZBP1Q9H171 429 aa33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 NXF3Q9H4D5 531 aaKnown RBP33.56■■■□□ 2.96
CTDNEP1-206ENST00000571409 A0A1B0GUA9 196 aa33.55■■■□□ 2.96
CTDNEP1-206ENST00000571409 ARL5CA6NH57 179 aa33.55■■■□□ 2.96
CTDNEP1-206ENST00000571409 NPTXRO95502 500 aa33.55■■■□□ 2.96
CTDNEP1-206ENST00000571409 CDC25AP30304 524 aa33.55■■■□□ 2.96
CTDNEP1-206ENST00000571409 ATP2C1P98194 919 aaPredicted RBP33.55■■■□□ 2.96
CTDNEP1-206ENST00000571409 LARP1BQ659C4 914 aaKnown RBP33.55■■■□□ 2.96
CTDNEP1-206ENST00000571409 TMEM175Q9BSA9 504 aa33.55■■■□□ 2.96
CTDNEP1-206ENST00000571409 FZD8Q9H461 694 aa33.55■■■□□ 2.96
CTDNEP1-206ENST00000571409 POLD4Q9HCU8 107 aa33.55■■■□□ 2.96
CTDNEP1-206ENST00000571409 C19orf67A6NJJ6 358 aa33.54■■■□□ 2.96
CTDNEP1-206ENST00000571409 INPPL1O15357 1258 aa33.54■■■□□ 2.96
CTDNEP1-206ENST00000571409 CXCL14O95715 111 aa33.54■■■□□ 2.96
CTDNEP1-206ENST00000571409 PPP2R5AQ15172 486 aa33.54■■■□□ 2.96
CTDNEP1-206ENST00000571409 FAM187BQ17R55 369 aa33.54■■■□□ 2.96
CTDNEP1-206ENST00000571409 TMEM184AQ6ZMB5 413 aa33.54■■■□□ 2.96
CTDNEP1-206ENST00000571409 DEPTORQ8TB45 409 aa33.54■■■□□ 2.96
CTDNEP1-206ENST00000571409 GIT1Q9Y2X7 761 aa33.54■■■□□ 2.96
CTDNEP1-206ENST00000571409 E9PMD0 336 aa33.53■■■□□ 2.96
CTDNEP1-206ENST00000571409 ALDH2P05091 517 aa33.53■■■□□ 2.96
CTDNEP1-206ENST00000571409 AUTS2Q8WXX7 1259 aa33.53■■■□□ 2.96
CTDNEP1-206ENST00000571409 ZFP42Q96MM3 310 aa33.53■■■□□ 2.96
CTDNEP1-206ENST00000571409 POP1Q99575 1024 aaKnown RBP33.53■■■□□ 2.96
CTDNEP1-206ENST00000571409 DNM3Q9UQ16 869 aa33.53■■■□□ 2.96
CTDNEP1-206ENST00000571409 FAN1Q9Y2M0 1017 aa33.53■■■□□ 2.96
CTDNEP1-206ENST00000571409 USP15Q9Y4E8 981 aaPredicted RBP33.53■■■□□ 2.96
CTDNEP1-206ENST00000571409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP33.52■■■□□ 2.96
CTDNEP1-206ENST00000571409 CTSAP10619 480 aa33.52■■■□□ 2.96
CTDNEP1-206ENST00000571409 AKAP5P24588 427 aa33.52■■■□□ 2.96
CTDNEP1-206ENST00000571409 SCNN1GP51170 649 aa33.52■■■□□ 2.96
CTDNEP1-206ENST00000571409 MAPK6Q16659 721 aa33.52■■■□□ 2.96
CTDNEP1-206ENST00000571409 KIFAP3Q92845 792 aa33.52■■■□□ 2.96
CTDNEP1-206ENST00000571409 IFT74Q96LB3 600 aa33.52■■■□□ 2.96
CTDNEP1-206ENST00000571409 MMTAG2Q9BU76 263 aaKnown RBP33.52■■■□□ 2.96
CTDNEP1-206ENST00000571409 VN1R3Q9BXE9 311 aa33.52■■■□□ 2.96
CTDNEP1-206ENST00000571409 MIOSQ9NXC5 875 aa33.52■■■□□ 2.96
CTDNEP1-206ENST00000571409 TDRD15B5MCY1 1934 aaKnown RBP33.51■■■□□ 2.96
CTDNEP1-206ENST00000571409 TTLL13PA6NNM8 815 aa33.51■■■□□ 2.95
CTDNEP1-206ENST00000571409 PI4K2BG5E9Z4 385 aa33.51■■■□□ 2.95
CTDNEP1-206ENST00000571409 NRP1O14786 923 aa33.51■■■□□ 2.95
CTDNEP1-206ENST00000571409 PRKCBP05771 671 aa33.51■■■□□ 2.95
CTDNEP1-206ENST00000571409 LIG1P18858 919 aa33.51■■■□□ 2.95
CTDNEP1-206ENST00000571409 TMEM132AQ24JP5 1023 aa33.51■■■□□ 2.95
CTDNEP1-206ENST00000571409 ANKRD54Q6NXT1 300 aa33.51■■■□□ 2.95
CTDNEP1-206ENST00000571409 COLGALT2Q8IYK4 626 aa33.51■■■□□ 2.95
CTDNEP1-206ENST00000571409 KIFC3Q9BVG8 833 aa33.51■■■□□ 2.95
CTDNEP1-206ENST00000571409 CCDC113Q9H0I3 377 aa33.51■■■□□ 2.95
CTDNEP1-206ENST00000571409 CLASP2O75122 1294 aaKnown RBP33.5■■■□□ 2.95
CTDNEP1-206ENST00000571409 PRPF4BQ13523 1007 aaKnown RBP33.5■■■□□ 2.95
CTDNEP1-206ENST00000571409 PDZD7Q9H5P4 517 aa33.5■■■□□ 2.95
CTDNEP1-206ENST00000571409 PARP2Q9UGN5 583 aa33.5■■■□□ 2.95
CTDNEP1-206ENST00000571409 HCFC2Q9Y5Z7 792 aa33.5■■■□□ 2.95
CTDNEP1-206ENST00000571409 IRAK3Q9Y616 596 aa33.5■■■□□ 2.95
CTDNEP1-206ENST00000571409 C5orf42Q9H799 3197 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 VWA3AA6NCI4 1184 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 N4BP3O15049 544 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 OR1G1P47890 313 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 CUL4AQ13619 759 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 GIT2Q14161 759 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 TMEM87AQ8NBN3 555 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 CASP10Q92851 521 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 BACH2Q9BYV9 841 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 STK39Q9UEW8 545 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 USP20Q9Y2K6 914 aa33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 PRG3Q9Y2Y8 225 aaPredicted RBP33.49■■■□□ 2.95
CTDNEP1-206ENST00000571409 ACKR2O00590 384 aa33.48■■■□□ 2.95
CTDNEP1-206ENST00000571409 DSC1Q08554 894 aa33.48■■■□□ 2.95
CTDNEP1-206ENST00000571409 ZRSR1Q15695 479 aaKnown RBP33.48■■■□□ 2.95
CTDNEP1-206ENST00000571409 KCNK18Q7Z418 384 aa33.48■■■□□ 2.95
CTDNEP1-206ENST00000571409 KLK14Q9P0G3 267 aa33.48■■■□□ 2.95
CTDNEP1-206ENST00000571409 EDN1P05305 212 aa33.47■■■□□ 2.95
CTDNEP1-206ENST00000571409 ARL6IP4Q66PJ3 421 aaKnown RBP33.47■■■□□ 2.95
CTDNEP1-206ENST00000571409 SYCE2Q6PIF2 218 aa33.47■■■□□ 2.95
CTDNEP1-206ENST00000571409 GSTCDQ8NEC7 633 aa33.47■■■□□ 2.95
CTDNEP1-206ENST00000571409 APOL5Q9BWW9 433 aa33.47■■■□□ 2.95
CTDNEP1-206ENST00000571409 S1PR5Q9H228 398 aa33.47■■■□□ 2.95
CTDNEP1-206ENST00000571409 MARCH5Q9NX47 278 aa33.47■■■□□ 2.95
CTDNEP1-206ENST00000571409 SSBP05455 408 aaKnown RBP eCLIP33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms