RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 DKC1O60832 514 aaKnown RBP eCLIP15.98■□□□□ 0.15
CIITA-205ENST00000571186 ADH1AP07327 375 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 CFHP08603 1231 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 RFX1P22670 979 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 HOXA11P31270 313 aaPredicted RBP15.98■□□□□ 0.15
CIITA-205ENST00000571186 OR1G1P47890 313 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 LAMTOR4Q0VGL1 99 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 NONOQ15233 471 aaKnown RBP eCLIP15.98■□□□□ 0.15
CIITA-205ENST00000571186 UBXN11Q5T124 520 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 ELMSAN1Q6PJG2 1045 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 TAS1R1Q7RTX1 841 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 EXOC8Q8IYI6 725 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 PSPC1Q8WXF1 523 aaKnown RBP15.98■□□□□ 0.15
CIITA-205ENST00000571186 MBOAT7Q96N66 472 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 RPS6KC1Q96S38 1066 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 BMP2KQ9NSY1 1161 aaPredicted RBP15.98■□□□□ 0.15
CIITA-205ENST00000571186 KCNJ14Q9UNX9 436 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 SSX2IPQ9Y2D8 614 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 CACNA1IQ9P0X4 2223 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 DMXL1Q9Y485 3027 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 JAK2O60674 1132 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 N4BP1O75113 896 aaKnown RBP15.97■□□□□ 0.15
CIITA-205ENST00000571186 CDKL5O76039 1030 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 SOD2P04179 222 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 ITGA4P13612 1032 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 FDPSP14324 419 aaKnown RBP15.97■□□□□ 0.15
CIITA-205ENST00000571186 NPY5RQ15761 445 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 INF2Q27J81 1249 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 MOXD1Q6UVY6 613 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 CMASQ8NFW8 434 aaPredicted RBP15.97■□□□□ 0.15
CIITA-205ENST00000571186 RSAD2Q8WXG1 361 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 UBN1Q9NPG3 1134 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 ORC3Q9UBD5 711 aaPredicted RBP15.97■□□□□ 0.15
CIITA-205ENST00000571186 DPP7Q9UHL4 492 aa15.97■□□□□ 0.15
CIITA-205ENST00000571186 ARID2Q68CP9 1835 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 M0R2N6 131 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 INPPL1O15357 1258 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 TEX28O15482 410 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 SLC37A4O43826 429 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 GLUD1P00367 558 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 P4HBP07237 508 aaKnown RBP15.96■□□□□ 0.15
CIITA-205ENST00000571186 SPATA31D3P0C874 917 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 NCLP19338 710 aaKnown RBP15.96■□□□□ 0.15
CIITA-205ENST00000571186 RFC5P40937 340 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 ID4P47928 161 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 FOSBP53539 338 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 PPP2R5CQ13362 524 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 SPATA31D4Q6ZUB0 917 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 RNF149Q8NC42 400 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 CNNM3Q8NE01 707 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 NSUN7Q8NE18 718 aaKnown RBP15.96■□□□□ 0.15
CIITA-205ENST00000571186 KCNG4Q8TDN1 519 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 STAMQ92783 540 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 FAM20AQ96MK3 541 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 HERC2P3Q9BVR0 1158 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 DHX33Q9H6R0 707 aaKnown RBP15.96■□□□□ 0.15
CIITA-205ENST00000571186 WDR6Q9NNW5 1121 aaKnown RBP15.96■□□□□ 0.15
CIITA-205ENST00000571186 WNT16Q9UBV4 365 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 LIMCH1Q9UPQ0 1083 aa15.96■□□□□ 0.15
CIITA-205ENST00000571186 STK36Q9NRP7 1315 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 ASAP2O43150 1006 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 MARCH6O60337 910 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 RFPL2O75678 378 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 ERLIN2O94905 339 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 GLUD2P49448 558 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 KIAA0319Q5VV43 1072 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 GALNT17Q6IS24 598 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 CYP26C1Q6V0L0 522 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 OTUD6AQ7L8S5 288 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 KRT25Q7Z3Z0 450 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 PALB2Q86YC2 1186 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 CCDC83Q8IWF9 413 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 COLGALT2Q8IYK4 626 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 SLC44A3Q8N4M1 653 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 DAGLBQ8NCG7 672 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 SMG8Q8ND04 991 aaKnown RBP15.95■□□□□ 0.14
CIITA-205ENST00000571186 TCP11Q8WWU5 503 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 SMG7Q92540 1137 aaKnown RBP15.95■□□□□ 0.14
CIITA-205ENST00000571186 MYADMQ96S97 322 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 GAD1Q99259 594 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 PIDD1Q9HB75 910 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 MARCH5Q9NX47 278 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 WRAP73Q9P2S5 460 aaPredicted RBP15.95■□□□□ 0.14
CIITA-205ENST00000571186 VAV3Q9UKW4 847 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 CA14Q9ULX7 337 aa15.95■□□□□ 0.14
CIITA-205ENST00000571186 CLUHO75153 1309 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 KRBA1A5PL33 1030 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 ARL5CA6NH57 179 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 GAS2O43903 313 aaKnown RBP15.94■□□□□ 0.14
CIITA-205ENST00000571186 NR1I2O75469 434 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 YWHABP31946 246 aaKnown RBP15.94■□□□□ 0.14
CIITA-205ENST00000571186 NCBP1Q09161 790 aaKnown RBP15.94■□□□□ 0.14
CIITA-205ENST00000571186 XKR9Q5GH70 373 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 ERMP1Q7Z2K6 904 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 FERMT3Q86UX7 667 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 OXER1Q8TDS5 423 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 CPB2Q96IY4 423 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 PHF20Q9BVI0 1012 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 COLEC11Q9BWP8 271 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms