RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 NLRP7Q8WX94 980 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 TCEAL3Q969E4 200 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 TRAIPQ9BWF2 469 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 EMILIN2Q9BXX0 1053 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 EIF2AQ9BY44 585 aaKnown RBP8.15□□□□□ -1.1
SMG6-205ENST00000570659 IFT122Q9HBG6 1241 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 MRPL17Q9NRX2 175 aaKnown RBP8.15□□□□□ -1.1
SMG6-205ENST00000570659 CHST7Q9NS84 486 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 DIAPH3Q9NSV4 1193 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 RBM12Q9NTZ6 932 aaKnown RBP8.15□□□□□ -1.1
SMG6-205ENST00000570659 CDH7Q9ULB5 785 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 NDRG2Q9UN36 371 aaKnown RBP8.15□□□□□ -1.1
SMG6-205ENST00000570659 IGKV6-21A0A0C4DH24 114 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 K7ESF4 209 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 GAS2O43903 313 aaKnown RBP8.14□□□□□ -1.11
SMG6-205ENST00000570659 TBC1D4O60343 1298 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 ZNF623O75123 536 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 ZMYND10O75800 440 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 OATP04181 439 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 URODP06132 367 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 GLUD2P49448 558 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 SCNN1GP51170 649 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 RNASELQ05823 741 aaKnown RBP8.14□□□□□ -1.11
SMG6-205ENST00000570659 RING1Q06587 406 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 GIT2Q14161 759 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 GRM2Q14416 872 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 PLA2G4FQ68DD2 849 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 TANGO2Q6ICL3 276 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 MIS18BP1Q6P0N0 1132 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 GLB1LQ6UWU2 654 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 Q6ZS52 159 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 CATIPQ7Z7H3 387 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 MRPL10Q7Z7H8 261 aaKnown RBP8.14□□□□□ -1.11
SMG6-205ENST00000570659 FAM160A2Q8N612 972 aaPredicted RBP8.14□□□□□ -1.11
SMG6-205ENST00000570659 TMEM87AQ8NBN3 555 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 RSPRY1Q96DX4 576 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 MBOAT7Q96N66 472 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 GAD1Q99259 594 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 CLSTN3Q9BQT9 956 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 CHMP4BQ9H444 224 aaKnown RBP8.14□□□□□ -1.11
SMG6-205ENST00000570659 RIC8AQ9NPQ8 531 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 WRAP73Q9P2S5 460 aaPredicted RBP8.14□□□□□ -1.11
SMG6-205ENST00000570659 DNMT3BQ9UBC3 853 aaKnown RBP8.14□□□□□ -1.11
SMG6-205ENST00000570659 FAN1Q9Y2M0 1017 aa8.14□□□□□ -1.11
SMG6-205ENST00000570659 IGSF10Q6WRI0 2623 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 SRRM3A6NNA2 597 aaPredicted RBP8.13□□□□□ -1.11
SMG6-205ENST00000570659 TAF4O00268 1085 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 CHMP2AO43633 222 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 DDAH1O94760 285 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 ADH1AP07327 375 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 CEBPBP17676 345 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 MLH1P40692 756 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 OR1G1P47890 313 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 PRKCQQ04759 706 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 CSRP2Q16527 193 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 MTERF2Q49AM1 385 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 ZBTB41Q5SVQ8 909 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 ODR4Q5SWX8 454 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 HEATR6Q6AI08 1181 aaKnown RBP8.13□□□□□ -1.11
SMG6-205ENST00000570659 LAIR1Q6GTX8 287 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 PKN3Q6P5Z2 889 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 UNQ6494/PRO21346Q6UXR6 183 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 CDR2LQ86X02 465 aaPredicted RBP8.13□□□□□ -1.11
SMG6-205ENST00000570659 HASPINQ8TF76 798 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 NXPE3Q969Y0 559 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 TCEAL4Q96EI5 215 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 TCEANC2Q96MN5 208 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 ZSWIM3Q96MP5 696 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 SCLT1Q96NL6 688 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 MAP7D2Q96T17 732 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 OSBPL6Q9BZF3 934 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 CHRDQ9H2X0 955 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 UNC45AQ9H3U1 944 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 OSBPL3Q9H4L5 887 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 RSAD1Q9HA92 442 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 PIDD1Q9HB75 910 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 BMP2KQ9NSY1 1161 aaPredicted RBP8.13□□□□□ -1.11
SMG6-205ENST00000570659 AGPAT5Q9NUQ2 364 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.13□□□□□ -1.11
SMG6-205ENST00000570659 SEC63Q9UGP8 760 aaKnown RBP8.13□□□□□ -1.11
SMG6-205ENST00000570659 FBXW11Q9UKB1 542 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 GMEB2Q9UKD1 530 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 BRPF3Q9ULD4 1205 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 FREM2Q5SZK8 3169 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 LAMA5O15230 3695 aa8.13□□□□□ -1.11
SMG6-205ENST00000570659 FLNBO75369 2602 aaKnown RBP8.12□□□□□ -1.11
SMG6-205ENST00000570659 PRC1O43663 620 aa8.12□□□□□ -1.11
SMG6-205ENST00000570659 KCNK5O95279 499 aa8.12□□□□□ -1.11
SMG6-205ENST00000570659 RETP07949 1114 aa8.12□□□□□ -1.11
SMG6-205ENST00000570659 SDHBP21912 280 aa8.12□□□□□ -1.11
SMG6-205ENST00000570659 SMARCA1P28370 1054 aa8.12□□□□□ -1.11
SMG6-205ENST00000570659 CCR2P41597 374 aa8.12□□□□□ -1.11
SMG6-205ENST00000570659 RPS9P46781 194 aaKnown RBP8.12□□□□□ -1.11
SMG6-205ENST00000570659 SOX9P48436 509 aa8.12□□□□□ -1.11
SMG6-205ENST00000570659 PXNP49023 591 aaPredicted RBP8.12□□□□□ -1.11
SMG6-205ENST00000570659 NT5C2P49902 561 aa8.12□□□□□ -1.11
SMG6-205ENST00000570659 NAPAP54920 295 aa8.12□□□□□ -1.11
SMG6-205ENST00000570659 MFAP1P55081 439 aaKnown RBP8.12□□□□□ -1.11
SMG6-205ENST00000570659 TRAF1Q13077 416 aa8.12□□□□□ -1.11
SMG6-205ENST00000570659 NONOQ15233 471 aaKnown RBP eCLIP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms