RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TPM2P07951 284 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ERCC5P28715 1186 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 PRCPP42785 496 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 GPC3P51654 580 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 CASP5P51878 434 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 NLRP11P59045 1033 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZNF200P98182 395 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 LRRC63Q05C16 580 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 EHHADHQ08426 723 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 PCBP1Q15365 356 aaKnown RBP eCLIP7.22□□□□□ -1.254e-8■■■■□ 25.5
CTDNEP1-204ENST00000570484 QPCTQ16769 361 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 KNOP1Q1ED39 458 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 PUS10Q3MIT2 529 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 TRIM60Q495X7 471 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 COBLL1Q53SF7 1204 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 CT47A1Q5JQC4 288 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 TJAP1Q5JTD0 557 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 CDCA2Q69YH5 1023 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ARMCX5Q6P1M9 558 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 BRICD5Q6PL45 260 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 C11orf57Q6ZUT1 292 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 CATSPER4Q7RTX7 472 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZNF720Q7Z2F6 126 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 SRGAP1Q7Z6B7 1085 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 KSR1Q8IVT5 923 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 KIAA0319LQ8IZA0 1049 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ADSSL1Q8N142 457 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 AOPEPQ8N6M6 819 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 LINC01465Q8N7H1 131 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 TMEM161BQ8NDZ6 487 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ANKRD20A12PQ8NF67 263 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 NOC3LQ8WTT2 800 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 P2RX5Q93086 422 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 DHTKD1Q96HY7 919 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 PAWRQ96IZ0 340 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZNF668Q96K58 619 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 OSMRQ99650 979 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 FDXACB1Q9BRP7 624 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 MRPL4Q9BYD3 311 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 NFKBIZQ9BYH8 718 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 GBP3Q9H0R5 595 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ST6GALNAC4Q9H4F1 302 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 TYW1Q9NV66 732 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 PRMT7Q9NVM4 692 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ARHGAP28Q9P2N2 729 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ANKFY1Q9P2R3 1169 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 HCSTQ9UBK5 93 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 RWDD2AQ9UIY3 292 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 TBX20Q9UMR3 447 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 PCDHB3Q9Y5E6 796 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ADGRA3Q8IWK6 1321 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 FRMPD3Q5JV73 1810 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 ARID2Q68CP9 1835 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 SMTNL1A8MU46 457 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 COL6A1P12109 1028 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 CCNE1P24864 410 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 RPL13P26373 211 aaKnown RBP7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 CRYBB1P53674 252 aaPredicted RBP7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 STX17P56962 302 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 PTENP60484 403 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 ADAM17P78536 824 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 GTF2BQ00403 316 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 GUCA2AQ02747 115 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 POU5F1BQ06416 359 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 PAK2Q13177 524 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 PRPF4BQ13523 1007 aaKnown RBP7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 BMT2Q1RMZ1 405 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZC2HC1CQ53FD0 456 aaPredicted RBP7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 SLC39A5Q6ZMH5 540 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 LRRC8DQ7L1W4 858 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAM114A1Q8IWE2 563 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAM126BQ8IXS8 530 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 CSGALNACT2Q8N6G5 542 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 SLC43A3Q8NBI5 491 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 RNF214Q8ND24 703 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 SCFD1Q8WVM8 642 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 PRIMPOLQ96LW4 560 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 BPIFA3Q9BQP9 254 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 ADPGKQ9BRR6 497 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 TCHPQ9BT92 498 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 FUCA2Q9BTY2 467 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 FGFBP2Q9BYJ0 223 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 CELF4Q9BZC1 486 aaKnown RBP7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 TRPV6Q9H1D0 765 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 HIPK3Q9H422 1215 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 PRDM5Q9NQX1 630 aaPredicted RBP7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 CGNQ9P2M7 1197 aaKnown RBP7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 MAGEC2Q9UBF1 373 aaPredicted RBP7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 PRKAG2Q9UGJ0 569 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 PIN4Q9Y237 131 aaKnown RBP7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 CDY2AQ9Y6F7 541 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 GRIN2DO15399 1336 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 CNTNAP2Q9UHC6 1331 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 TCHHQ07283 1943 aa7.21□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZMYM2Q9UBW7 1377 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 TRIM49BA6NDI0 452 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 GOLGA6L3A6NEY3 463 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 PDXKO00764 312 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 IKBKBO14920 756 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 N4BP3O15049 544 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms