RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 C11orf16Q9NQ32 467 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 TSHZ2Q9NRE2 1034 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 MRPL17Q9NRX2 175 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 PRMT7Q9NVM4 692 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 DZANK1Q9NVP4 752 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 LRWD1Q9UFC0 647 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 PARP2Q9UGN5 583 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 DBR1Q9UK59 544 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 SSX2IPQ9Y2D8 614 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 PRG3Q9Y2Y8 225 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 STK24Q9Y6E0 443 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 C2CD2LO14523 706 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 NRP1O14786 923 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 MED24O75448 989 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 DDHD2O94830 711 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 NPTXRO95502 500 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 URODP06132 367 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 SPATA31C1P0DKV0 1188 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 ARF4P18085 180 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 LIG1P18858 919 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 SP100P23497 879 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 KLRC2P26717 231 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 RPA1P27694 616 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 PLA2G5P39877 138 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 MLH1P40692 756 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 MTHFRP42898 656 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 KCNC3Q14003 757 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 PPP2R5AQ15172 486 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 RABEP1Q15276 862 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 ATAT1Q5SQI0 421 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 RARS2Q5T160 578 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 MCTP1Q6DN14 999 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 SLC27A1Q6PCB7 646 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 SYCE2Q6PIF2 218 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 ELMSAN1Q6PJG2 1045 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 POTEGQ6S5H5 508 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 PADI6Q6TGC4 694 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 CABP7Q86V35 215 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 TMEM173Q86WV6 379 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 CDR2LQ86X02 465 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 IFNLR1Q8IU57 520 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 SMG8Q8ND04 991 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 DEPTORQ8TB45 409 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 SUSD6Q92537 303 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 EDAQ92838 391 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 IFT74Q96LB3 600 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 MFSD14AQ96MC6 490 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 NECTIN4Q96NY8 510 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 RPS6KC1Q96S38 1066 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 GAD1Q99259 594 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 ADPGKQ9BRR6 497 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 COLEC11Q9BWP8 271 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 NFKBIZQ9BYH8 718 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 C2orf40Q9H1Z8 148 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 S1PR5Q9H228 398 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 ADAM7Q9H2U9 754 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 GPRC5CQ9NQ84 441 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 GIT1Q9Y2X7 761 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 ARIH1Q9Y4X5 557 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 HES2Q9Y543 173 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 IRAK3Q9Y616 596 aa9.89□□□□□ -0.83
NPLOC4-204ENST00000570324 ARL5CA6NH57 179 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 H3BQV1 296 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 MUTP22033 750 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 AKAP5P24588 427 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 SCNN1GP51170 649 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 PRPF4BQ13523 1007 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 MAPK6Q16659 721 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 C8orf34Q49A92 452 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 BCL7CQ8WUZ0 217 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 PRIMPOLQ96LW4 560 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 KLHL5Q96PQ7 755 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 RNF39Q9H2S5 420 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 BDP1A6H8Y1 2624 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 VCANP13611 3396 aa9.88□□□□□ -0.83
NPLOC4-204ENST00000570324 SPTBN5Q9NRC6 3674 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 A0A1B0GUA9 196 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 N4BP3O15049 544 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 B4GALT5O43286 388 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 TADA2AO75478 443 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 SOD2P04179 222 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 ADH1AP07327 375 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 EPCAMP16422 314 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 CYP11B2P19099 503 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 NAMPTP43490 491 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 FXR2P51116 673 aaKnown RBP eCLIP9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 AFF1P51825 1210 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 ZXDAP98168 799 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 PTGDRQ13258 359 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 PDIA5Q14554 519 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 NBR1Q14596 966 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 PTPN14Q15678 1187 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 AMHR2Q16671 573 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 KRT79Q5XKE5 535 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 TRIM67Q6ZTA4 783 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 APBB1IPQ7Z5R6 666 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 SUGP1Q8IWZ8 645 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 COLGALT2Q8IYK4 626 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 C12orf76Q8N812 135 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 SNX29Q8TEQ0 813 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms