RNA–Protein interactions for RNA: ENST00000570098.2

CHRFAM7A-207, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5

Gene CHRFAM7A, Length 316 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-207ENST00000570098 PCDHB2Q9Y5E7 798 aa2.46□□□□□ -2.02
CHRFAM7A-207ENST00000570098 COL5A1P20908 1838 aaPredicted RBP2.46□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ARID1BQ8NFD5 2236 aaPredicted RBP2.46□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ARHGEF17Q96PE2 2063 aaPredicted RBP2.46□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TRPM6Q9BX84 2022 aa2.46□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CNTNAP2Q9UHC6 1331 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TPRP12270 2363 aaKnown RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CACNA1BQ00975 2339 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TMEM221A6NGB7 291 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TTLL13PA6NNM8 815 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 C2CD4DB7Z1M9 353 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 M0R296 226 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 INPPL1O15357 1258 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ASAP2O43150 1006 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 B4GALT5O43286 388 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 GAS2O43903 313 aaKnown RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 MARCH6O60337 910 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 NEMFO60524 1076 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TSPAN1O60635 241 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 USO1O60763 962 aaKnown RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 DKC1O60832 514 aaKnown RBP eCLIP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 LILRB3O75022 631 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ERLIN2O94905 339 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 LYPLA2O95372 231 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 NPTXRO95502 500 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CXCL14O95715 111 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 EFEMP2O95967 443 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 POMCP01189 267 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SSBP05455 408 aaKnown RBP eCLIP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 WEE2P0C1S8 567 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 OR52Z1P0C646 297 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SPATA31C1P0DKV0 1188 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CTSAP10619 480 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SKIP12755 728 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ITGA4P13612 1032 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ARF4P18085 180 aaPredicted RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 NCLP19338 710 aaKnown RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 GLRA2P23416 452 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SP100P23497 879 aaPredicted RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 HOXA11P31270 313 aaPredicted RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 MCM7P33993 719 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CA8P35219 290 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PPM1AP35813 382 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ARL2P36404 184 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 RARRES1P49788 294 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 MRE11P49959 708 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TOB1P50616 345 aaPredicted RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 RAB27AP51159 221 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SCNN1GP51170 649 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 VCPP55072 806 aaKnown RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PTENP60484 403 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ZXDAP98168 799 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CDC42EP1Q00587 391 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 KRT17Q04695 432 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 RNASELQ05823 741 aaKnown RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 MBTD1Q05BQ5 628 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TRIM29Q14134 588 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CBX2Q14781 532 aaPredicted RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PTPN14Q15678 1187 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ZNF174Q15697 407 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ECM1Q16610 540 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TTC38Q5R3I4 469 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 RARS2Q5T160 578 aaKnown RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 EEF1DP3Q658K8 133 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PDE12Q6L8Q7 609 aaKnown RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 KIAA1841Q6NSI8 718 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 POTEGQ6S5H5 508 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 GLB1LQ6UWU2 654 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TMEM184AQ6ZMB5 413 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 FAM43BQ6ZT52 329 aaPredicted RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 HFE2Q6ZVN8 426 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 MAEAQ7L5Y9 396 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 OTUD6AQ7L8S5 288 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TAS1R1Q7RTX1 841 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TMC7Q7Z402 723 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SRGAP1Q7Z6B7 1085 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 DDX53Q86TM3 631 aaKnown RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TPH2Q8IWU9 490 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 COLGALT2Q8IYK4 626 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SLFN12Q8IYM2 578 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 VPS52Q8N1B4 723 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 C4orf32Q8N8J7 132 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 MRPL43Q8N983 215 aaKnown RBP2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 RNF149Q8NC42 400 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PRSS33Q8NF86 280 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 URGCPQ8TCY9 931 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SLC7A3Q8WY07 619 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 BSNDQ8WZ55 320 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CASP10Q92851 521 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PGBD4Q96DM1 585 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CCDC51Q96ER9 411 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TMEM169Q96HH4 297 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 IGSF21Q96ID5 467 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 C8orf76Q96K31 380 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 RPGRIP1Q96KN7 1286 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 MFSD14AQ96MC6 490 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ZFP42Q96MM3 310 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 GAD1Q99259 594 aa2.45□□□□□ -2.02
CHRFAM7A-207ENST00000570098 POP1Q99575 1024 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms