RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 KIFC3Q9BVG8 833 aa13.8□□□□□ -0.2
NSMCE1-214ENST00000569236 PRDM12Q9H4Q4 367 aa13.8□□□□□ -0.2
NSMCE1-214ENST00000569236 FAM105AQ9NUU6 356 aa13.8□□□□□ -0.2
NSMCE1-214ENST00000569236 FAM13BQ9NYF5 915 aa13.8□□□□□ -0.2
NSMCE1-214ENST00000569236 KCNG1Q9UIX4 513 aa13.8□□□□□ -0.2
NSMCE1-214ENST00000569236 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
NSMCE1-214ENST00000569236 NPHP3-ACAD11A0A0J9YXS1 232 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 SFI1A8K8P3 1242 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 EOMESO95936 686 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 FGFR1P11362 822 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 ARF4P18085 180 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 NPTX2P47972 431 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 CACNB1Q02641 598 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 AMHR2Q16671 573 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 PAN2Q504Q3 1202 aaKnown RBP13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 KRBA2Q6ZNG9 492 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 CMTR2Q8IYT2 770 aaKnown RBP13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 CCDC51Q96ER9 411 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 CPB2Q96IY4 423 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 BPIFA3Q9BQP9 254 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 REEP2Q9BRK0 252 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 FZD8Q9H461 694 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 KMT5AQ9NQR1 393 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 ODF2LQ9ULJ1 636 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 FNDC1Q4ZHG4 1894 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 NLRC5Q86WI3 1866 aa13.79□□□□□ -0.2
NSMCE1-214ENST00000569236 TBKBP1A7MCY6 615 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 B4GALT5O43286 388 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 PLS3P13797 630 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 GATMP50440 423 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 SMTNP53814 917 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 ERVK-21P61565 698 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 PRPF4BQ13523 1007 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 FAM187BQ17R55 369 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 NAALADL2Q58DX5 795 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 SV2BQ7L1I2 683 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 SPRED2Q7Z698 418 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 ZNF598Q86UK7 904 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 ABI1Q8IZP0 508 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 MYLIPQ8WY64 445 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 ERCC4Q92889 916 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 GAS2L1Q99501 681 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 C17orf80Q9BSJ5 609 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 CCDC113Q9H0I3 377 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 LARSQ9P2J5 1176 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 ZKSCAN5Q9Y2L8 839 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 PCDHB2Q9Y5E7 798 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 CNTNAP2Q9UHC6 1331 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 TRANK1O15050 2925 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 RALGAPA2Q2PPJ7 1873 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 A0A087X0B3 334 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 K7ERI5 159 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 ACKR2O00590 384 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 ZNF623O75123 536 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 TBCAO75347 108 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 PRKCBP05771 671 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 ATF7P17544 494 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 MSNP26038 577 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 DPCR1Q3MIW9 517 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 LONRF3Q496Y0 759 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 UBXN11Q5T124 520 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 SARM1Q6SZW1 724 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 PGBD4Q96DM1 585 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 SAMD11Q96NU1 681 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 TRIM6Q9C030 488 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 TMEM117Q9H0C3 514 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 HOOK1Q9UJC3 728 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 RWDD3Q9Y3V2 267 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 PHLPP2Q6ZVD8 1323 aa13.78□□□□□ -0.2
NSMCE1-214ENST00000569236 GOLGA6L19H0YKK7 550 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 FAM13AO94988 1023 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 PTMAP06454 111 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 FOSL2P15408 326 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 NLRP12P59046 1061 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 GIT2Q14161 759 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 SLC27A1Q6PCB7 646 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 DHX40Q8IX18 779 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 TMEM192Q8IY95 271 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 CNNM3Q8NE01 707 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 SPIRE2Q8WWL2 714 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 LPPQ93052 612 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 NTPCRQ9BSD7 190 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 ZHX3Q9H4I2 956 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 ARHGAP28Q9P2N2 729 aa13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 MRPL42Q9Y6G3 142 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-214ENST00000569236 SLC16A4O15374 487 aa13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 BRD2P25440 801 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 CLLU1OSQ5K130 101 aa13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 CDR2LQ86X02 465 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 MYCT1Q8N699 235 aa13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 IQUBQ8NA54 791 aa13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 HELQQ8TDG4 1101 aa13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 CLP1Q92989 425 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 EIF2AQ9BY44 585 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 CUEDC2Q9H467 287 aa13.76□□□□□ -0.21
NSMCE1-214ENST00000569236 TMEM134Q9H6X4 195 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms