RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 KIFC3Q9BVG8 833 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 BHMT2Q9H2M3 363 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 FZD8Q9H461 694 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 PDZD7Q9H5P4 517 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 EPHX3Q9H6B9 360 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 NGRNQ9NPE2 291 aaKnown RBP8.67□□□□□ -1.02
CDH3-209ENST00000569080 ENTPD7Q9NQZ7 604 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 DDX19AQ9NUU7 478 aaKnown RBP8.67□□□□□ -1.02
CDH3-209ENST00000569080 LRWD1Q9UFC0 647 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 KIF3AQ9Y496 699 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 HCFC2Q9Y5Z7 792 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 IRAK3Q9Y616 596 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 PLXNA3P51805 1871 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 FSD2A1L4K1 749 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 ARL5CA6NH57 179 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 PI4K2BG5E9Z4 385 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 POMCP01189 267 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 CTSAP10619 480 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 CDC25AP30304 524 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 NAMPTP43490 491 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 ALDH7A1P49419 539 aaKnown RBP8.66□□□□□ -1.02
CDH3-209ENST00000569080 SCNN1GP51170 649 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 KRT17Q04695 432 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 SMC1AQ14683 1233 aaKnown RBP8.66□□□□□ -1.02
CDH3-209ENST00000569080 PTPN14Q15678 1187 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 HYIQ5T013 277 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 SLC27A1Q6PCB7 646 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 SYCE2Q6PIF2 218 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 DDX53Q86TM3 631 aaKnown RBP8.66□□□□□ -1.02
CDH3-209ENST00000569080 COLGALT2Q8IYK4 626 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 VPS52Q8N1B4 723 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 CNNM3Q8NE01 707 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 URGCPQ8TCY9 931 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 MICAL1Q8TDZ2 1067 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 AUTS2Q8WXX7 1259 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 TMEM169Q96HH4 297 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 GAD1Q99259 594 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 TMEM175Q9BSA9 504 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 RUSC1Q9BVN2 902 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 BACH2Q9BYV9 841 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 S1PR5Q9H228 398 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 PRMT7Q9NVM4 692 aaPredicted RBP8.66□□□□□ -1.02
CDH3-209ENST00000569080 PUF60Q9UHX1 559 aaKnown RBP8.66□□□□□ -1.02
CDH3-209ENST00000569080 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 FAM50BQ9Y247 325 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 USP20Q9Y2K6 914 aa8.66□□□□□ -1.02
CDH3-209ENST00000569080 USP15Q9Y4E8 981 aaPredicted RBP8.66□□□□□ -1.02
CDH3-209ENST00000569080 MYH15Q9Y2K3 1946 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.65□□□□□ -1.02
CDH3-209ENST00000569080 CARNS1A5YM72 827 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 E9PMD0 336 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 F8W810 466 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 LILRB3O75022 631 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 CLASP2O75122 1294 aaKnown RBP8.65□□□□□ -1.02
CDH3-209ENST00000569080 NPTXRO95502 500 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 PRKCBP05771 671 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 ITGA4P13612 1032 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 RNASELQ05823 741 aaKnown RBP8.65□□□□□ -1.02
CDH3-209ENST00000569080 CBX2Q14781 532 aaPredicted RBP8.65□□□□□ -1.02
CDH3-209ENST00000569080 NAB2Q15742 525 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 TMEM119Q4V9L6 283 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 EEF1DP3Q658K8 133 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 MCTP1Q6DN14 999 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 ANKRD54Q6NXT1 300 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 TAS1R3Q7RTX0 852 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 TMC7Q7Z402 723 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 ZBTB8OSQ8IWT0 167 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 FEZF2Q8TBJ5 459 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 LRRC15Q8TF66 581 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 PNMA5Q96PV4 448 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 RAB34Q9BZG1 259 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 GBP3Q9H0R5 595 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 C2orf40Q9H1Z8 148 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 CXCL16Q9H2A7 254 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 POLD4Q9HCU8 107 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 UBN1Q9NPG3 1134 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 MIOSQ9NXC5 875 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 ARHGAP28Q9P2N2 729 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 KANSL3Q9P2N6 904 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 CDH22Q9UJ99 828 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 SMC3Q9UQE7 1217 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 GIT1Q9Y2X7 761 aa8.65□□□□□ -1.02
CDH3-209ENST00000569080 C2orf16Q68DN1 1984 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 VWA8A3KMH1 1905 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 PHLPP2Q6ZVD8 1323 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 LOC730098B7Z3J9 87 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 ACKR2O00590 384 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 ABLIM1O14639 778 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 PTGESO14684 152 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 NRP1O14786 923 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 AKAP5P24588 427 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 SSTR3P32745 418 aaPredicted RBP8.64□□□□□ -1.03
CDH3-209ENST00000569080 GRIK3Q13003 919 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 MAPK6Q16659 721 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 NT5DC1Q5TFE4 455 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 KRT79Q5XKE5 535 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 ARL6IP4Q66PJ3 421 aaKnown RBP8.64□□□□□ -1.03
CDH3-209ENST00000569080 RINT1Q6NUQ1 792 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 LLGL2Q6P1M3 1020 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 DTHD1Q6ZMT9 781 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms