RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 KIF5AQ12840 1032 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 MXD4Q14582 209 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 CCL14Q16627 93 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 DUSP28Q4G0W2 176 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 SEZ6Q53EL9 994 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 LMBRD2Q68DH5 695 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 IQCEQ6IPM2 695 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 ZBTB33Q86T24 672 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 USP37Q86T82 979 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 ZBTB8OSQ8IWT0 167 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 FAM84AQ96KN4 292 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 INO80BQ9C086 356 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 KATNBL1Q9H079 304 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 SIX2Q9NPC8 291 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 TOPORSQ9NS56 1045 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 ADAMTS1Q9UHI8 967 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 AJAP1Q9UKB5 411 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 AGO2Q9UKV8 859 aaKnown RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 ZNF215Q9UL58 517 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 DUSP10Q9Y6W6 482 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 PHLPP2Q6ZVD8 1323 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 H3BRB1 525 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 FANCGO15287 622 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 PPFIA4O75335 1185 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 GFPT2O94808 682 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 TNNI1P19237 187 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 GARTP22102 1010 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 KLRC1P26715 233 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 USP8P40818 1118 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 MAGEA1P43355 309 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 NAP1L1P55209 391 aaKnown RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 INHBEP58166 350 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 MAPK6Q16659 721 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 HGSNATQ68CP4 663 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 EXOC8Q8IYI6 725 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 SLC35F6Q8N357 371 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 CCDC102AQ96A19 550 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 ELMO3Q96BJ8 720 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 LENG1Q96BZ8 264 aaPredicted RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 FAM212AQ96EL1 285 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 SCLT1Q96NL6 688 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 FNBP1Q96RU3 617 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 JPH2Q9BR39 696 aaPredicted RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 MSTO1Q9BUK6 570 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 LACRTQ9GZZ8 138 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 TUT1Q9H6E5 874 aaKnown RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 UBE2TQ9NPD8 197 aaPredicted RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 FLRT1Q9NZU1 646 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 AKT3Q9Y243 479 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 PCDHA13Q9Y5I0 950 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 RCCD1A6NED2 376 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 ZNF263O14978 683 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 CLDN3O15551 220 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 N4BP1O75113 896 aaKnown RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 CSDE1O75534 798 aaKnown RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 STAT1P42224 750 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 ARHGAP25P42331 645 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 NLRP11P59045 1033 aaKnown RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 SREBF2Q12772 1141 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 DRAP1Q14919 205 aaPredicted RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 IQSEC1Q6DN90 963 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 CYP4F22Q6NT55 531 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 C17orf99Q6UX52 265 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 CDR2LQ86X02 465 aaPredicted RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 EHBP1Q8NDI1 1231 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 PARD3BQ8TEW8 1205 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 SYN2Q92777 582 aaPredicted RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 TMEM117Q9H0C3 514 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 AIPL1Q9NZN9 384 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 APEX2Q9UBZ4 518 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMG1-215ENST00000568239 GINS2Q9Y248 185 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 TLL2Q9Y6L7 1015 aa7.67□□□□□ -1.18
SMG1-215ENST00000568239 V9GYY5 206 aaPredicted RBP7.67□□□□□ -1.18
SMG1-215ENST00000568239 MYH10P35580 1976 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 TTLL13PA6NNM8 815 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 LRRIQ3A6PVS8 624 aaPredicted RBP7.66□□□□□ -1.18
SMG1-215ENST00000568239 ADCY6O43306 1168 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 GAS2O43903 313 aaKnown RBP7.66□□□□□ -1.18
SMG1-215ENST00000568239 EDN1P05305 212 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 TERF1P54274 439 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 PTK2Q05397 1052 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 CYP24A1Q07973 514 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 DGKDQ16760 1214 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 MORN1Q5T089 497 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 C1orf220Q5T0J3 134 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 KRT39Q6A163 491 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 SLFN12LQ6IEE8 588 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 PHLDB3Q6NSJ2 640 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 DPY19L2P1Q6NXN4 242 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 PPM1KQ8N3J5 372 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 MRPL4Q9BYD3 311 aaKnown RBP7.66□□□□□ -1.18
SMG1-215ENST00000568239 SEPT11Q9NVA2 429 aaKnown RBP7.66□□□□□ -1.18
SMG1-215ENST00000568239 DNAH12Q6ZR08 3092 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 PASKQ96RG2 1323 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 A0A087X0T9 212 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 SSU72P8A0A1W2PR75 194 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 RBM47A0AV96 593 aaKnown RBP7.66□□□□□ -1.18
SMG1-215ENST00000568239 ENC1O14682 589 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 EXTL3O43909 919 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms