RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 POTEGQ6S5H5 508 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 FOXD4L3Q6VB84 417 aaPredicted RBP14.28□□□□□ -0.12
TSC2-220ENST00000568238 CATSPER3Q86XQ3 398 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 ZNF280BQ86YH2 543 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 MCPH1Q8NEM0 835 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 BCL7CQ8WUZ0 217 aaPredicted RBP14.28□□□□□ -0.12
TSC2-220ENST00000568238 SUSD6Q92537 303 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 CASP10Q92851 521 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 CPB2Q96IY4 423 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 FAM193BQ96PV7 902 aaPredicted RBP14.28□□□□□ -0.12
TSC2-220ENST00000568238 POLR3CQ9BUI4 534 aaPredicted RBP14.28□□□□□ -0.12
TSC2-220ENST00000568238 PHF7Q9BWX1 381 aaPredicted RBP14.28□□□□□ -0.12
TSC2-220ENST00000568238 EIF2AQ9BY44 585 aaKnown RBP14.28□□□□□ -0.12
TSC2-220ENST00000568238 CSRNP2Q9H175 543 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 UBN1Q9NPG3 1134 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 KANSL3Q9P2N6 904 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 DNAJB4Q9UDY4 337 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 MUTYHQ9UIF7 546 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 DBR1Q9UK59 544 aaKnown RBP14.28□□□□□ -0.12
TSC2-220ENST00000568238 IPPQ9Y573 584 aa14.28□□□□□ -0.12
TSC2-220ENST00000568238 A0A087WWV3 80 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 LOC730098B7Z3J9 87 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 B4GALT3O60512 393 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 F13A1P00488 732 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 CTSAP10619 480 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 ITGA4P13612 1032 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 HOXB8P17481 243 aaPredicted RBP14.27□□□□□ -0.13
TSC2-220ENST00000568238 GIT2Q14161 759 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 AMHR2Q16671 573 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 HERC4Q5GLZ8 1057 aaPredicted RBP14.27□□□□□ -0.13
TSC2-220ENST00000568238 HAUS3Q68CZ6 603 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 DDX53Q86TM3 631 aaKnown RBP14.27□□□□□ -0.13
TSC2-220ENST00000568238 RNF135Q8IUD6 432 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 HACE1Q8IYU2 909 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 TMEM87AQ8NBN3 555 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 SMG8Q8ND04 991 aaKnown RBP14.27□□□□□ -0.13
TSC2-220ENST00000568238 NACC1Q96RE7 527 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 TRIM6Q9C030 488 aaPredicted RBP14.27□□□□□ -0.13
TSC2-220ENST00000568238 ZSCAN16Q9H4T2 348 aaPredicted RBP14.27□□□□□ -0.13
TSC2-220ENST00000568238 GPRC5CQ9NQ84 441 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 STK39Q9UEW8 545 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 HCFC2Q9Y5Z7 792 aa14.27□□□□□ -0.13
TSC2-220ENST00000568238 TECTAO75443 2155 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 ARHGEF35A5YM69 484 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 LRRIQ4A6NIV6 560 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 CLASP2O75122 1294 aaKnown RBP14.26□□□□□ -0.13
TSC2-220ENST00000568238 DDHD2O94830 711 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 BRD1O95696 1058 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 CXCL14O95715 111 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 POMCP01189 267 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 PDIA4P13667 645 aaKnown RBP14.26□□□□□ -0.13
TSC2-220ENST00000568238 ARF4P18085 180 aaPredicted RBP14.26□□□□□ -0.13
TSC2-220ENST00000568238 RPA1P27694 616 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 MLH1P40692 756 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 AFF1P51825 1210 aaKnown RBP14.26□□□□□ -0.13
TSC2-220ENST00000568238 PTGDRQ13258 359 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 CBX2Q14781 532 aaPredicted RBP14.26□□□□□ -0.13
TSC2-220ENST00000568238 TPRNQ4KMQ1 711 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 SYCE2Q6PIF2 218 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 MAEAQ7L5Y9 396 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 AUTS2Q8WXX7 1259 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 TMEM175Q9BSA9 504 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 APOL5Q9BWW9 433 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 S1PR5Q9H228 398 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.26□□□□□ -0.13
TSC2-220ENST00000568238 HES2Q9Y543 173 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 IRAK3Q9Y616 596 aa14.26□□□□□ -0.13
TSC2-220ENST00000568238 DENND4AQ7Z401 1863 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 ZNF318Q5VUA4 2279 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 ARL5CA6NH57 179 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 INPPL1O15357 1258 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 B4GALT5O43286 388 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
TSC2-220ENST00000568238 CEBPZQ03701 1054 aaKnown RBP14.25□□□□□ -0.13
TSC2-220ENST00000568238 CDCA2Q69YH5 1023 aaPredicted RBP14.25□□□□□ -0.13
TSC2-220ENST00000568238 SLC27A1Q6PCB7 646 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 ZBTB8OSQ8IWT0 167 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 RPGRIP1Q96KN7 1286 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 GAD1Q99259 594 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 APOL6Q9BWW8 343 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 VN1R3Q9BXE9 311 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 NXF3Q9H4D5 531 aaKnown RBP14.25□□□□□ -0.13
TSC2-220ENST00000568238 PRMT7Q9NVM4 692 aaPredicted RBP14.25□□□□□ -0.13
TSC2-220ENST00000568238 DZANK1Q9NVP4 752 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 FAN1Q9Y2M0 1017 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 PRG3Q9Y2Y8 225 aaPredicted RBP14.25□□□□□ -0.13
TSC2-220ENST00000568238 ZDHHC9Q9Y397 364 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 CLIC4Q9Y696 253 aa14.25□□□□□ -0.13
TSC2-220ENST00000568238 ZMYM2Q9UBW7 1377 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 NPTXRO95502 500 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 ALDH2P05091 517 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 MUTP22033 750 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 DDIT3P35638 169 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 PLA2G5P39877 138 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 CCT6AP40227 531 aaKnown RBP14.24□□□□□ -0.13
TSC2-220ENST00000568238 SCNN1GP51170 649 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 ITIH3Q06033 890 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 SF3A1Q15459 793 aaKnown RBP14.24□□□□□ -0.13
TSC2-220ENST00000568238 PTPN14Q15678 1187 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 CES5AQ6NT32 575 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms