RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ROBO3Q96MS0 1386 aa12.42□□□□□ -0.42
CDH1-210ENST00000566612 M0R2N6 131 aa12.42□□□□□ -0.42
CDH1-210ENST00000566612 RTN2O75298 545 aa12.42□□□□□ -0.42
CDH1-210ENST00000566612 RNF8O76064 485 aa12.42□□□□□ -0.42
CDH1-210ENST00000566612 SEC24CP53992 1094 aa12.42□□□□□ -0.42
CDH1-210ENST00000566612 BSPRYQ5W0U4 402 aa12.42□□□□□ -0.42
CDH1-210ENST00000566612 GPD1LQ8N335 351 aa12.42□□□□□ -0.42
CDH1-210ENST00000566612 ACAD9Q9H845 621 aa12.42□□□□□ -0.42
CDH1-210ENST00000566612 SGPL1O95470 568 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 SPATA31C1P0DKV0 1188 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 FGFR4P22455 802 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 POLR2BP30876 1174 aaKnown RBP12.41□□□□□ -0.42
CDH1-210ENST00000566612 PMS2P54278 862 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 SEZ6Q53EL9 994 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 MEI1Q5TIA1 1274 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 ANGEL2Q5VTE6 544 aaKnown RBP12.41□□□□□ -0.42
CDH1-210ENST00000566612 PAXIP1Q6ZW49 1069 aaPredicted RBP12.41□□□□□ -0.42
CDH1-210ENST00000566612 PALM2Q8IXS6 379 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 GDAP1Q8TB36 358 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 LRRC15Q8TF66 581 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 TRIM11Q96F44 468 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 APOL6Q9BWW8 343 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 CALN1Q9BXU9 219 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 KLHL11Q9NVR0 708 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 KCND2Q9NZV8 630 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 FZD1Q9UP38 647 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 F8VZ95 297 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 PODXLO00592 558 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 SLC26A4O43511 780 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 FAM153BP0C7A2 387 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 TMEM253P0C7T8 217 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 EZRP15311 586 aaKnown RBP12.41□□□□□ -0.42
CDH1-210ENST00000566612 HADHQ16836 314 aaKnown RBP12.41□□□□□ -0.42
CDH1-210ENST00000566612 FAM153CQ494X1 144 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 FBF1Q8TES7 1133 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 WDR18Q9BV38 432 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 OLFML3Q9NRN5 406 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 FAM153AQ9UHL3 310 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 STK38LQ9Y2H1 464 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 A0A087WUV0 522 aaPredicted RBP12.41□□□□□ -0.42
CDH1-210ENST00000566612 NKRFO15226 690 aaKnown RBP eCLIP12.41□□□□□ -0.42
CDH1-210ENST00000566612 GMPSP49915 693 aaPredicted RBP12.41□□□□□ -0.42
CDH1-210ENST00000566612 SLMAPQ14BN4 828 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 CBWD6Q4V339 395 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 CBWD3Q5JTY5 395 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 CBWD5Q5RIA9 395 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 SESTD1Q86VW0 696 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 AKT1S1Q96B36 256 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 FERMT1Q9BQL6 677 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 ZWILCHQ9H900 591 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 PRDM4Q9UKN5 801 aa12.41□□□□□ -0.42
CDH1-210ENST00000566612 PI4K2BG5E9Z4 385 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 DDX3XO00571 662 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDH1-210ENST00000566612 MAP2K7O14733 419 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 FANCGO15287 622 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 GNA15P30679 374 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 GBP1P32455 592 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 ZNF280CQ8ND82 737 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 BCAS3Q9H6U6 928 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 TOPORSQ9NS56 1045 aaPredicted RBP12.4□□□□□ -0.42
CDH1-210ENST00000566612 DIS3Q9Y2L1 958 aaKnown RBP12.4□□□□□ -0.42
CDH1-210ENST00000566612 DGKZQ13574 1117 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 KIAA1755Q5JYT7 1200 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 SLFN12LQ6IEE8 588 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 EFCAB13Q8IY85 973 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 ETNPPLQ8TBG4 499 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 PURBQ96QR8 312 aaKnown RBP12.4□□□□□ -0.42
CDH1-210ENST00000566612 PSMD1Q99460 953 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 TLR3O15455 904 aaKnown RBP12.4□□□□□ -0.42
CDH1-210ENST00000566612 CLTAP09496 248 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 CHRNA3P32297 505 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 EIF3BP55884 814 aaKnown RBP12.4□□□□□ -0.42
CDH1-210ENST00000566612 PRKCEQ02156 737 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 TMED2Q15363 201 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 THOC1Q96FV9 657 aaKnown RBP12.4□□□□□ -0.42
CDH1-210ENST00000566612 ANKRD36BP1Q96IX9 119 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 TEX13BQ9BXU2 312 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 DNAJC18Q9H819 358 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 ACP6Q9NPH0 428 aa12.4□□□□□ -0.42
CDH1-210ENST00000566612 SUCLA2Q9P2R7 463 aaPredicted RBP12.4□□□□□ -0.42
CDH1-210ENST00000566612 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 DGAT1O75907 488 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 RFX1P22670 979 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 ALDH3A1P30838 453 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 YWHAEP62258 255 aaKnown RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 LRRC14Q15048 493 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 ZRSR2Q15696 482 aaKnown RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 NBPF12Q5TAG4 269 aaPredicted RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 CASC4Q6P4E1 433 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 SH3BP5LQ7L8J4 393 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 ERICH1Q86X53 443 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 RHPN2Q8IUC4 686 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 C7orf31Q8N865 590 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 CCDC197Q8NCU1 140 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 SYTL5Q8TDW5 730 aaPredicted RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 ELAC2Q9BQ52 826 aaKnown RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 ADAM33Q9BZ11 813 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 KCTD10Q9H3F6 313 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 ZNF142P52746 1687 aaPredicted RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 MMEP08473 750 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms