RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 TIMP1P01033 207 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 CXCL10P02778 98 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 GHRP10912 638 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNHG20-204ENST00000566583 AXLP30530 894 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 CYP2C18P33260 490 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 LRRC63Q05C16 580 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 PRPF4BQ13523 1007 aaKnown RBP16.97■□□□□ 0.31
SNHG20-204ENST00000566583 DSC3Q14574 896 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 NCAPHQ15003 741 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 EDRF1Q3B7T1 1238 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 EEF1DP3Q658K8 133 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 CATSPER4Q7RTX7 472 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 GAS2L3Q86XJ1 694 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 SLC9A9Q8IVB4 645 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 ENOX1Q8TC92 643 aaKnown RBP16.97■□□□□ 0.31
SNHG20-204ENST00000566583 ZBTB45Q96K62 511 aaPredicted RBP16.97■□□□□ 0.31
SNHG20-204ENST00000566583 ANP32EQ9BTT0 268 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 PPP1R12CQ9BZL4 782 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 TMX1Q9H3N1 280 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 TSPY26PQ9H489 355 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 PDZD7Q9H5P4 517 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 CGNQ9P2M7 1197 aaKnown RBP16.97■□□□□ 0.31
SNHG20-204ENST00000566583 PADI3Q9ULW8 664 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 ST3GAL5Q9UNP4 418 aa16.97■□□□□ 0.31
SNHG20-204ENST00000566583 FAM189A1O60320 539 aa16.96■□□□□ 0.31
SNHG20-204ENST00000566583 TOM1L1O75674 476 aa16.96■□□□□ 0.31
SNHG20-204ENST00000566583 CAVIN2O95810 425 aa16.96■□□□□ 0.31
SNHG20-204ENST00000566583 CD52P31358 61 aa16.96■□□□□ 0.31
SNHG20-204ENST00000566583 STX17P56962 302 aa16.96■□□□□ 0.31
SNHG20-204ENST00000566583 MYBPC2Q14324 1141 aa16.96■□□□□ 0.31
SNHG20-204ENST00000566583 PLEKHG4Q58EX7 1191 aa16.96■□□□□ 0.31
SNHG20-204ENST00000566583 ATF7IP2Q5U623 682 aa16.96■□□□□ 0.31
SNHG20-204ENST00000566583 LRRC55Q6ZSA7 311 aa16.96■□□□□ 0.31
SNHG20-204ENST00000566583 DHX40Q8IX18 779 aaKnown RBP16.96■□□□□ 0.31
SNHG20-204ENST00000566583 CPB2Q96IY4 423 aa16.96■□□□□ 0.31
SNHG20-204ENST00000566583 A0A0B4J269 797 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 HNRNPDLO14979 420 aaKnown RBP16.96■□□□□ 0.3
SNHG20-204ENST00000566583 GPR182O15218 404 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 ERLIN2O94905 339 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 GARTP22102 1010 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 ZNF165P49910 485 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 MCL1Q07820 350 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 TCTN1Q2MV58 587 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 UBXN11Q5T124 520 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 FAM43BQ6ZT52 329 aaPredicted RBP16.96■□□□□ 0.3
SNHG20-204ENST00000566583 SYCP3Q8IZU3 236 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 GOLGA5Q8TBA6 731 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 SCLYQ96I15 445 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 CBWD1Q9BRT8 395 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 HSD3B7Q9H2F3 369 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 CBX8Q9HC52 389 aa16.96■□□□□ 0.3
SNHG20-204ENST00000566583 BICDL2A1A5D9 508 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 IKBKBO14920 756 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 N4BP3O15049 544 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 CLIC2O15247 247 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 CALUO43852 315 aaPredicted RBP16.95■□□□□ 0.3
SNHG20-204ENST00000566583 MGEA5O60502 916 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 RFC2P35250 354 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 LIG4P49917 911 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 CCL23P55773 120 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 MCCD1P59942 119 aaPredicted RBP16.95■□□□□ 0.3
SNHG20-204ENST00000566583 MFSD5Q6N075 450 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 MPZL3Q6UWV2 235 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 HS2ST1Q7LGA3 356 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 IRF2BP1Q8IU81 584 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 ZSWIM2Q8NEG5 633 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 FAM200AQ8TCP9 573 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 CCDC51Q96ER9 411 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 FBXL18Q96ME1 805 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 HTATIP2Q9BUP3 242 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 TRAIPQ9BWF2 469 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 CDT1Q9H211 546 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 CHST12Q9NRB3 414 aa16.95■□□□□ 0.3
SNHG20-204ENST00000566583 NR3C1P04150 777 aa16.94■□□□□ 0.3
SNHG20-204ENST00000566583 PAK2Q13177 524 aa16.94■□□□□ 0.3
SNHG20-204ENST00000566583 SPATA1Q5VX52 437 aa16.94■□□□□ 0.3
SNHG20-204ENST00000566583 SLFN12LQ6IEE8 588 aa16.94■□□□□ 0.3
SNHG20-204ENST00000566583 NOTUMQ6P988 496 aa16.94■□□□□ 0.3
SNHG20-204ENST00000566583 RTN4RL1Q86UN2 441 aaPredicted RBP16.94■□□□□ 0.3
SNHG20-204ENST00000566583 CDR2LQ86X02 465 aaPredicted RBP16.94■□□□□ 0.3
SNHG20-204ENST00000566583 LINC01599Q8WXQ3 324 aa16.94■□□□□ 0.3
SNHG20-204ENST00000566583 BICD1Q96G01 975 aa16.94■□□□□ 0.3
SNHG20-204ENST00000566583 IFIH1Q9BYX4 1025 aaKnown RBP16.94■□□□□ 0.3
SNHG20-204ENST00000566583 NAT10Q9H0A0 1025 aaKnown RBP16.94■□□□□ 0.3
SNHG20-204ENST00000566583 TDRD15B5MCY1 1934 aaKnown RBP16.93■□□□□ 0.3
SNHG20-204ENST00000566583 FNDC1Q4ZHG4 1894 aaPredicted RBP16.93■□□□□ 0.3
SNHG20-204ENST00000566583 KIAA0391O15091 583 aaKnown RBP16.93■□□□□ 0.3
SNHG20-204ENST00000566583 MCF2P10911 925 aa16.93■□□□□ 0.3
SNHG20-204ENST00000566583 RAG1P15918 1043 aa16.93■□□□□ 0.3
SNHG20-204ENST00000566583 FKBP3Q00688 224 aaKnown RBP16.93■□□□□ 0.3
SNHG20-204ENST00000566583 MYL5Q02045 173 aa16.93■□□□□ 0.3
SNHG20-204ENST00000566583 NFX1Q12986 1120 aaKnown RBP16.93■□□□□ 0.3
SNHG20-204ENST00000566583 ARMCX5Q6P1M9 558 aa16.93■□□□□ 0.3
SNHG20-204ENST00000566583 SLC27A1Q6PCB7 646 aa16.93■□□□□ 0.3
SNHG20-204ENST00000566583 CRELD2Q6UXH1 353 aaPredicted RBP16.93■□□□□ 0.3
SNHG20-204ENST00000566583 C7orf61Q8IZ16 206 aa16.93■□□□□ 0.3
SNHG20-204ENST00000566583 AOPEPQ8N6M6 819 aa16.93■□□□□ 0.3
SNHG20-204ENST00000566583 DBF4BQ8NFT6 615 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms