RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 SYT1P21579 422 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 AFF1P51825 1210 aaKnown RBP13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 DLX2Q07687 328 aaPredicted RBP13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 DUSP6Q16828 381 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 RINT1Q6NUQ1 792 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 TMEM184AQ6ZMB5 413 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 C1orf186Q6ZWK4 172 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 TMC7Q7Z402 723 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 KCNK18Q7Z418 384 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 DDX53Q86TM3 631 aaKnown RBP13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 RBM23Q86U06 439 aaKnown RBP13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 ZNF280BQ86YH2 543 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 FAM178BQ8IXR5 827 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 MRPL43Q8N983 215 aaKnown RBP13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 DEPTORQ8TB45 409 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 SNX21Q969T3 373 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 IGSF21Q96ID5 467 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 MSLNLQ96KJ4 702 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 NECAB3Q96P71 396 aaPredicted RBP13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 TCF25Q9BQ70 676 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 TMEM175Q9BSA9 504 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 TRIM6Q9C030 488 aaPredicted RBP13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 C17orf75Q9HAS0 396 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 STK39Q9UEW8 545 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 GTF3C3Q9Y5Q9 886 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 IRAK3Q9Y616 596 aa13.96□□□□□ -0.17
LPCAT4-206ENST00000566581 VPS37CA5D8V6 355 aaPredicted RBP13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 NT5C1B-RDH14C9J2C7 533 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 N4BP3O15049 544 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 LINC01565O15544 149 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 TBX10O75333 385 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 DDHD2O94830 711 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 GLP2RO95838 553 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 PRKCBP05771 671 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 GUCY2CP25092 1073 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 SLC11A1P49279 550 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 COASYQ13057 564 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 PRPF4BQ13523 1007 aaKnown RBP13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 KCNC3Q14003 757 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 DAW1Q8N136 415 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 SYT2Q8N9I0 419 aaPredicted RBP13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 DRC1Q96MC2 740 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 PNMA5Q96PV4 448 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 FAM193BQ96PV7 902 aaPredicted RBP13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 GAD1Q99259 594 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 NTPCRQ9BSD7 190 aaKnown RBP13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 ENTPD7Q9NQZ7 604 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 KCND2Q9NZV8 630 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 CLEC1BQ9P126 229 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 DNAJB4Q9UDY4 337 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 PRKAG3Q9UGI9 489 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 KCNG1Q9UIX4 513 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 HES2Q9Y543 173 aa13.95□□□□□ -0.18
LPCAT4-206ENST00000566581 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 HIDE1A8MVS5 230 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 K7ERI5 159 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 PER2O15055 1255 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 B4GALT3O60512 393 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 HIP1RO75146 1068 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 NPTXRO95502 500 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 IL9P15248 144 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 LONP1P36776 959 aaKnown RBP13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 NDUFV1P49821 464 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 DSC1Q08554 894 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 MAPK7Q13164 816 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 SMAD4Q13485 552 aaKnown RBP13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 GIT2Q14161 759 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 SF3A1Q15459 793 aaKnown RBP13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 SMAD2Q15796 467 aaKnown RBP13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 TMEM119Q4V9L6 283 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 PLPP4Q5VZY2 271 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 TMEM173Q86WV6 379 aaPredicted RBP13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 COLGALT2Q8IYK4 626 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 VPS52Q8N1B4 723 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 GSTCDQ8NEC7 633 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 CDK5RAP3Q96JB5 506 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 RUSC1Q9BVN2 902 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 GBP3Q9H0R5 595 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 NXF3Q9H4D5 531 aaKnown RBP13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 PDZD7Q9H5P4 517 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 TMEM134Q9H6X4 195 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 POLD4Q9HCU8 107 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 CD207Q9UJ71 328 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 FAN1Q9Y2M0 1017 aa13.94□□□□□ -0.18
LPCAT4-206ENST00000566581 PHLPP2Q6ZVD8 1323 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 C2orf71A6NGG8 1288 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 NRP1O14786 923 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 MBTPS2O43462 519 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 CXCL14O95715 111 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 POMCP01189 267 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 CTSAP10619 480 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 MLH1P40692 756 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 UBA7P41226 1012 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 NPTX2P47972 431 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 SLC12A3P55017 1021 aa13.93□□□□□ -0.18
LPCAT4-206ENST00000566581 PEX3P56589 373 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms