RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 GDAQ9Y2T3 454 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 PCDHA5Q9Y5H7 936 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 UBE4BO95155 1302 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 TSC2P49815 1807 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 A0A1B0GUA9 196 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 K7ERI5 159 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 HNRNPDLO14979 420 aaKnown RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 FAM189A1O60320 539 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 GCNT3O95395 438 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 MBD3O95983 291 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 FGBP02675 491 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 ACTN1P12814 892 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 BMP6P22004 513 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 SCP2P22307 547 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 AXLP30530 894 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 PRPF4BQ13523 1007 aaKnown RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 ALCAMQ13740 583 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 CAMK4Q16566 473 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 ATF7IP2Q5U623 682 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 FAM109BQ6ICB4 259 aaPredicted RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 NOTUMQ6P988 496 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 RBM43Q6ZSC3 357 aaKnown RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 TMCO2Q7Z6W1 182 aaPredicted RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 ZNF598Q86UK7 904 aaKnown RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 CDR2LQ86X02 465 aaPredicted RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 SMYD4Q8IYR2 804 aaPredicted RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 SLC17A8Q8NDX2 589 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 CCDC51Q96ER9 411 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 GSDMAQ96QA5 445 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 ACO2Q99798 780 aaKnown RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 ADAM2Q99965 735 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 TARS2Q9BW92 718 aaKnown RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 EIF2AQ9BY44 585 aaKnown RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 MRPL4Q9BYD3 311 aaKnown RBP8.97□□□□□ -0.97
CDH13-208ENST00000566333 NUP62CLQ9H1M0 184 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 SLC39A2Q9NP94 309 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 CHST12Q9NRB3 414 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 RGS18Q9NS28 235 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 RNF19AQ9NV58 838 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 MAN1B1Q9UKM7 699 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 TNFSF13BQ9Y275 285 aa8.97□□□□□ -0.97
CDH13-208ENST00000566333 A0A0U1RQF3 1178 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 MEIS3P2A8K0S8 358 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 ANKRD63C9JTQ0 380 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 ENPP3O14638 875 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 N4BP3O15049 544 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 MEFVO15553 781 aaPredicted RBP8.96□□□□□ -0.98
CDH13-208ENST00000566333 EFCAB14O75071 495 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 PRPF6O94906 941 aaKnown RBP8.96□□□□□ -0.98
CDH13-208ENST00000566333 ADSSP30520 456 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 IKBKEQ14164 716 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 TWF2Q6IBS0 349 aaKnown RBP8.96□□□□□ -0.98
CDH13-208ENST00000566333 SLC27A1Q6PCB7 646 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 ZPBP2Q6X784 338 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 FAM43BQ6ZT52 329 aaPredicted RBP8.96□□□□□ -0.98
CDH13-208ENST00000566333 ECHDC2Q86YB7 292 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 TDHQ8IZJ6 230 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 CEP120Q8N960 986 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 SMG8Q8ND04 991 aaKnown RBP8.96□□□□□ -0.98
CDH13-208ENST00000566333 SMARCE1Q969G3 411 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 CCDC34Q96HJ3 373 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 RNPC3Q96LT9 517 aaKnown RBP8.96□□□□□ -0.98
CDH13-208ENST00000566333 CDT1Q9H211 546 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 NXF3Q9H4D5 531 aaKnown RBP8.96□□□□□ -0.98
CDH13-208ENST00000566333 C1orf112Q9NSG2 853 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 FAM105AQ9NUU6 356 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 TMEM63CQ9P1W3 806 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 ANKFY1Q9P2R3 1169 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 KCNG1Q9UIX4 513 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 STYXL1Q9Y6J8 313 aa8.96□□□□□ -0.98
CDH13-208ENST00000566333 VWA8A3KMH1 1905 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 SCN1AP35498 2009 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 ZBBXA8MT70 800 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 TGFB1I1O43294 461 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 TOM1L1O75674 476 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 SMC2O95347 1197 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 NPTXRO95502 500 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 CD44P16070 742 aaKnown RBP8.95□□□□□ -0.98
CDH13-208ENST00000566333 ABCD1P33897 745 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 FAM189BP81408 668 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 MCL1Q07820 350 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 STRN3Q13033 797 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 PSMD2Q13200 908 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 MORC3Q14149 939 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 NOLC1Q14978 699 aaKnown RBP eCLIP8.95□□□□□ -0.98
CDH13-208ENST00000566333 KLHL40Q2TBA0 621 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 DCAF4L1Q3SXM0 396 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 ZNF568Q3ZCX4 644 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 ZCWPW2Q504Y3 356 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 COBLL1Q53SF7 1204 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 CLLU1OSQ5K130 101 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 ZBTB41Q5SVQ8 909 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 ZNF658Q5TYW1 1059 aaPredicted RBP8.95□□□□□ -0.98
CDH13-208ENST00000566333 MPZL3Q6UWV2 235 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 SLC24A5Q71RS6 500 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 NPAS4Q8IUM7 802 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 MYOCDQ8IZQ8 938 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 ZNF507Q8TCN5 953 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 ZBTB45Q96K62 511 aaPredicted RBP8.95□□□□□ -0.98
CDH13-208ENST00000566333 ACCSQ96QU6 501 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms