RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 GPD1LQ8N335 351 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 CCDC155Q8N6L0 562 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 LMO3Q8TAP4 145 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 NPLOC4Q8TAT6 608 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 PSPC1Q8WXF1 523 aaKnown RBP9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 FAM81BQ96LP2 452 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 CHP1Q99653 195 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 APBA2Q99767 749 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 CCDC113Q9H0I3 377 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 L2HGDHQ9H9P8 463 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 NHEJ1Q9H9Q4 299 aaPredicted RBP9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 GPBP1L1Q9HC44 474 aaPredicted RBP9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 CPA4Q9UI42 421 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 ZNF215Q9UL58 517 aaPredicted RBP9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 ZSWIM8A7E2V4 1837 aa9.65□□□□□ -0.86
LSM3P5-201ENST00000566307 A6NJR5 290 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 TMEM88BA6NKF7 163 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 K7ERI5 159 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 KIF3CO14782 793 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 HNRNPDLO14979 420 aaKnown RBP9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 PJA2O43164 708 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 CA12O43570 354 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 ZC3H11AO75152 810 aaKnown RBP eCLIP9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 IPO7O95373 1038 aaKnown RBP9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 C22orf31O95567 290 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 SMPD1P17405 629 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 ADCYAP1R1P41586 468 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 ARHGAP25P42331 645 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 LIG4P49917 911 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 POLR2FP61218 127 aaKnown RBP9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 MYL7Q01449 175 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 GRM1Q13255 1194 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 TUBB2AQ13885 445 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 SNRNP35Q16560 246 aaKnown RBP9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 FAM187BQ17R55 369 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 SLC9C1Q4G0N8 1177 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 C1orf220Q5T0J3 134 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 ZBTB8OSQ8IWT0 167 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 EHBP1Q8NDI1 1231 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 MYRIPQ8NFW9 859 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 PARD3BQ8TEW8 1205 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 COPS5Q92905 334 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 TMEM143Q96AN5 459 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 CCDC42Q96M95 316 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 C16orf70Q9BSU1 422 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 TUBB2BQ9BVA1 445 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 CFHR5Q9BXR6 569 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 STK33Q9BYT3 514 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 TSGA10Q9BZW7 698 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 IKZF4Q9H2S9 585 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 GCNT4Q9P109 453 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 ARHGAP20Q9P2F6 1191 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 GJD2Q9UKL4 321 aa9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 GNEQ9Y223 722 aaKnown RBP9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 REXO2Q9Y3B8 237 aaKnown RBP9.64□□□□□ -0.87
LSM3P5-201ENST00000566307 A0A0B4J269 797 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 RRN3P2A6NIE6 340 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 LRRIQ4A6NIV6 560 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 ZNF233A6NK53 670 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 DPYSL4O14531 572 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 SORBS3O60504 671 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 MSCO60682 206 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 ADRB2P07550 413 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 MMP3P08254 477 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 CCDC172P0C7W6 258 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 ZNF865P0CJ78 1059 aaPredicted RBP9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 FERP16591 822 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 SLC9A1P19634 815 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 GPC3P51654 580 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 VAV2P52735 878 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 AP3M2P53677 418 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 SOX10P56693 466 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 PTENP60484 403 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 NKX3-2P78367 333 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 CDC42EP1Q00587 391 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 CYP24A1Q07973 514 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 LAMTOR4Q0VGL1 99 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 PSMD6Q15008 389 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 DGKDQ16760 1214 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 C10orf76Q5T2E6 689 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 KRT39Q6A163 491 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 C15orf39Q6ZRI6 1047 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 ZNF710Q8N1W2 664 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 SLAIN1Q8ND83 568 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 PLEKHO2Q8TD55 490 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 AFG1LQ8WV93 481 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 PRPF31Q8WWY3 499 aaKnown RBP9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 POMGNT1Q8WZA1 660 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 SPAG5Q96R06 1193 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 CRACR2AQ9BSW2 395 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 DESI2Q9BSY9 194 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 KIFC3Q9BVG8 833 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 MRPL4Q9BYD3 311 aaKnown RBP9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 INTS2Q9H0H0 1204 aaKnown RBP9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 FZD8Q9H461 694 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 TMEM8AQ9HCN3 771 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 LUC7LQ9NQ29 371 aaKnown RBP9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 APEX2Q9UBZ4 518 aa9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 R3HCC1Q9Y3T6 440 aaKnown RBP9.63□□□□□ -0.87
LSM3P5-201ENST00000566307 DOCK3Q8IZD9 2030 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms