RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 MYBPC2Q14324 1141 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 LPIN1Q14693 890 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 TWF2Q6IBS0 349 aaKnown RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 MFSD5Q6N075 450 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 FOXR2Q6PJQ5 311 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 TRAF7Q6Q0C0 670 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 TAS1R3Q7RTX0 852 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 HACE1Q8IYU2 909 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 C7orf61Q8IZ16 206 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 ENOX1Q8TC92 643 aaKnown RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 TMEM40Q8WWA1 233 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 POMGNT1Q8WZA1 660 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 APBB2Q92870 758 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 SCLYQ96I15 445 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 CPB2Q96IY4 423 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 BPIFA3Q9BQP9 254 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 IFIH1Q9BYX4 1025 aaKnown RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 TRIM6Q9C030 488 aaPredicted RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 SEMA6BQ9H3T3 888 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 AGO3Q9H9G7 860 aaKnown RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 AGPAT3Q9NRZ7 376 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 AGPAT5Q9NUQ2 364 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 ANKFY1Q9P2R3 1169 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 TRAF3IP3Q9Y228 551 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 TNFSF13BQ9Y275 285 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 NR2E3Q9Y5X4 410 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 CNTNAP2Q9UHC6 1331 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 TRIM43BA6NCK2 446 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 GOLGA6L19H0YKK7 550 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 B4GALT5O43286 388 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 TGFB1I1O43294 461 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 EXOC3O60645 756 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 PFKMP08237 780 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 HARSP12081 509 aaKnown RBP8.51□□□□□ -1.05
CDH1-208ENST00000565810 SKIP12755 728 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 HOXD13P35453 343 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 PPIGQ13427 754 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDH1-208ENST00000565810 NFIL3Q16649 462 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 AMHR2Q16671 573 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 KYAT1Q16773 422 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 EDRF1Q3B7T1 1238 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 DCAF4L1Q3SXM0 396 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 ZNF568Q3ZCX4 644 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 PLEKHG4Q58EX7 1191 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 SPATA1Q5VX52 437 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 ANKRD40Q6AI12 368 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 SLC27A1Q6PCB7 646 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 MPZL3Q6UWV2 235 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 C11orf57Q6ZUT1 292 aaPredicted RBP8.51□□□□□ -1.05
CDH1-208ENST00000565810 DEFB128Q7Z7B8 93 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 ZBTB33Q86T24 672 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 C12orf56Q8IXR9 622 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 CSGALNACT2Q8N6G5 542 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 FAM200AQ8TCP9 573 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 NOC3LQ8WTT2 800 aaKnown RBP8.51□□□□□ -1.05
CDH1-208ENST00000565810 TRIM43Q96BQ3 446 aaPredicted RBP8.51□□□□□ -1.05
CDH1-208ENST00000565810 LBHD1Q9BQE6 289 aaPredicted RBP8.51□□□□□ -1.05
CDH1-208ENST00000565810 MSTO1Q9BUK6 570 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 WNT8AQ9H1J5 351 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 KCTD10Q9H3F6 313 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 KIAA1586Q9HCI6 787 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 ERVK-5Q9HDB9 667 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 RNF216Q9NWF9 866 aaPredicted RBP8.51□□□□□ -1.05
CDH1-208ENST00000565810 AGO2Q9UKV8 859 aaKnown RBP8.51□□□□□ -1.05
CDH1-208ENST00000565810 USP20Q9Y2K6 914 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 FRMD4BQ9Y2L6 1034 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 UMODL1Q5DID0 1318 aa8.51□□□□□ -1.05
CDH1-208ENST00000565810 TRIM49BA6NDI0 452 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 ANKRD63C9JTQ0 380 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 TULP1O00294 542 aaPredicted RBP8.5□□□□□ -1.05
CDH1-208ENST00000565810 IKBKBO14920 756 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 NBNO60934 754 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 NPTXRO95502 500 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 GNA14O95837 355 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 CXCL10P02778 98 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 NR3C1P04150 777 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 MCF2P10911 925 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 EPB41P11171 864 aaKnown RBP8.5□□□□□ -1.05
CDH1-208ENST00000565810 ACTN1P12814 892 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 CDK11BP21127 795 aaKnown RBP8.5□□□□□ -1.05
CDH1-208ENST00000565810 NR2F2P24468 414 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 HOXA11P31270 313 aaPredicted RBP8.5□□□□□ -1.05
CDH1-208ENST00000565810 RAB27AP51159 221 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 CYP2J2P51589 502 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 MYL5Q02045 173 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 C1QBPQ07021 282 aaKnown RBP8.5□□□□□ -1.05
CDH1-208ENST00000565810 MCL1Q07820 350 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 IKBKEQ14164 716 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 MBTPS1Q14703 1052 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 NOLC1Q14978 699 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDH1-208ENST00000565810 CEP135Q66GS9 1140 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 TTI2Q6NXR4 508 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 FILIP1Q7Z7B0 1213 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 CREBRFQ8IUR6 639 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 SLC9A9Q8IVB4 645 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 FAM114A1Q8IWE2 563 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 GPD1LQ8N335 351 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 XXYLT1Q8NBI6 393 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 ANKRD20A12PQ8NF67 263 aa8.5□□□□□ -1.05
CDH1-208ENST00000565810 DBF4BQ8NFT6 615 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms