RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 RNF149Q8NC42 400 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 NOC3LQ8WTT2 800 aaKnown RBP12.16□□□□□ -0.46
SF3B3-205ENST00000564899 NLRP4Q96MN2 994 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 DUSP9Q99956 384 aaKnown RBP12.16□□□□□ -0.46
SF3B3-205ENST00000564899 FAM49AQ9H0Q0 323 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-205ENST00000564899 C2orf40Q9H1Z8 148 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 EPHX3Q9H6B9 360 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 TMEM206Q9H813 350 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 TYW1Q9NV66 732 aaKnown RBP12.16□□□□□ -0.46
SF3B3-205ENST00000564899 FANCLQ9NW38 375 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 TBX20Q9UMR3 447 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 EXOC7Q9UPT5 735 aa12.16□□□□□ -0.46
SF3B3-205ENST00000564899 PHLPP2Q6ZVD8 1323 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 EPOPA6NHQ4 379 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 ARHGEF15O94989 841 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 PHKA2P46019 1235 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 EFNA5P52803 228 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 STRN3Q13033 797 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 PPIGQ13427 754 aaKnown RBP eCLIP12.15□□□□□ -0.46
SF3B3-205ENST00000564899 ITGA7Q13683 1181 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 CDCA2Q69YH5 1023 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-205ENST00000564899 GDF6Q6KF10 455 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-205ENST00000564899 TAF2Q6P1X5 1199 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 OTOP2Q7RTS6 562 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 GOLGA5Q8TBA6 731 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 KCNN1Q92952 543 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 ZNF668Q96K58 619 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-205ENST00000564899 SCLT1Q96NL6 688 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 GBP3Q9H0R5 595 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 HSD3B7Q9H2F3 369 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 IKZF4Q9H2S9 585 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 TMEM134Q9H6X4 195 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 SAMSN1Q9NSI8 373 aaKnown RBP12.15□□□□□ -0.46
SF3B3-205ENST00000564899 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 SCN10AQ9Y5Y9 1956 aa12.15□□□□□ -0.46
SF3B3-205ENST00000564899 GRIN2DO15399 1336 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 A0A0U1RQG5 324 aaPredicted RBP12.14□□□□□ -0.47
SF3B3-205ENST00000564899 K7ERI5 159 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 ARVCFO00192 962 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 TGFB1I1O43294 461 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 FGFR1OPO95684 399 aaKnown RBP12.14□□□□□ -0.47
SF3B3-205ENST00000564899 CD4P01730 458 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 ZNF18P17022 549 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 GPC3P51654 580 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 PTENP60484 403 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 FKBP3Q00688 224 aaKnown RBP12.14□□□□□ -0.47
SF3B3-205ENST00000564899 PLCB2Q00722 1185 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 PTPN11Q06124 597 aaPredicted RBP12.14□□□□□ -0.47
SF3B3-205ENST00000564899 EDRF1Q3B7T1 1238 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 HSP90AA4PQ58FG1 418 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 CDKAL1Q5VV42 579 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 TAS1R3Q7RTX0 852 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 SPRED2Q7Z698 418 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 ZNF410Q86VK4 478 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 DNAJB3Q8WWF6 145 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 NLRP7Q8WX94 980 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 HERVK_113Q902F9 699 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 BICD1Q96G01 975 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 LRFN3Q9BTN0 628 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 SRRTQ9BXP5 876 aaKnown RBP12.14□□□□□ -0.47
SF3B3-205ENST00000564899 WNT8AQ9H1J5 351 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 THAP9Q9H5L6 903 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 C11orf16Q9NQ32 467 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 AGPAT3Q9NRZ7 376 aa12.14□□□□□ -0.47
SF3B3-205ENST00000564899 A0A087WZ62 844 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 INO80B-WBP1J3KQ70 363 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 HNRNPDLO14979 420 aaKnown RBP12.13□□□□□ -0.47
SF3B3-205ENST00000564899 CETN3O15182 167 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 CLIC2O15247 247 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 NR3C1P04150 777 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 PRKCBP05771 671 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 CDK11BP21127 795 aaKnown RBP12.13□□□□□ -0.47
SF3B3-205ENST00000564899 NR2F2P24468 414 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 RPL13P26373 211 aaKnown RBP12.13□□□□□ -0.47
SF3B3-205ENST00000564899 CCL23P55773 120 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 NLRP11P59045 1033 aaKnown RBP12.13□□□□□ -0.47
SF3B3-205ENST00000564899 CDC42EP1Q00587 391 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 POU5F1BQ06416 359 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 SPAG1Q07617 926 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 TMEM62Q0P6H9 643 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 ADAM9Q13443 819 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 PTGISQ16647 500 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 NFIL3Q16649 462 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 MAPK6Q16659 721 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 PSRC1Q6PGN9 363 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-205ENST00000564899 LRRC55Q6ZSA7 311 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 IFNLR1Q8IU57 520 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-205ENST00000564899 FAM114A1Q8IWE2 563 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 ZC3H3Q8IXZ2 948 aaKnown RBP12.13□□□□□ -0.47
SF3B3-205ENST00000564899 CEP63Q96MT8 703 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 FDXACB1Q9BRP7 624 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-205ENST00000564899 NFKBIZQ9BYH8 718 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 INO80BQ9C086 356 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-205ENST00000564899 CCDC113Q9H0I3 377 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 CERS4Q9HA82 394 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 IL23AQ9NPF7 189 aa12.13□□□□□ -0.47
SF3B3-205ENST00000564899 CGNQ9P2M7 1197 aaKnown RBP12.13□□□□□ -0.47
SF3B3-205ENST00000564899 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms