RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 HCSTQ9UBK5 93 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 CFAP45Q9UL16 551 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 PLAGL2Q9UPG8 496 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 IPPQ9Y573 584 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 MYH11P35749 1972 aa10.96□□□□□ -0.66
CDH1-206ENST00000564676 CNTNAP2Q9UHC6 1331 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 A0A1B0GUA9 196 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 MEIS3P2A8K0S8 358 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 N4BP3O15049 544 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 PPP6R2O75170 966 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 FAM13AO94988 1023 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 NPTXRO95502 500 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 PLS3P13797 630 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 DDIT3P35638 169 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 SMTNP53814 917 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 DNM1Q05193 864 aaKnown RBP10.95□□□□□ -0.66
CDH1-206ENST00000564676 RNASELQ05823 741 aaKnown RBP10.95□□□□□ -0.66
CDH1-206ENST00000564676 MAPK7Q13164 816 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 CSPP1Q1MSJ5 1256 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 NOMO2Q5JPE7 1267 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 SLC27A1Q6PCB7 646 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 AGMOQ6ZNB7 445 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 COLGALT1Q8NBJ5 622 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 SMG8Q8ND04 991 aaKnown RBP10.95□□□□□ -0.66
CDH1-206ENST00000564676 LRRC15Q8TF66 581 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 RSPH1Q8WYR4 309 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 LARP4BQ92615 738 aaKnown RBP10.95□□□□□ -0.66
CDH1-206ENST00000564676 MRPL38Q96DV4 380 aaKnown RBP10.95□□□□□ -0.66
CDH1-206ENST00000564676 ZNF558Q96NG5 402 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 FAM193BQ96PV7 902 aaPredicted RBP10.95□□□□□ -0.66
CDH1-206ENST00000564676 ADPGKQ9BRR6 497 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 CCDC113Q9H0I3 377 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 LMAN2LQ9H0V9 348 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 ZHX3Q9H4I2 956 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 TMEM134Q9H6X4 195 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 UBN1Q9NPG3 1134 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 USP20Q9Y2K6 914 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 RBM19Q9Y4C8 960 aaKnown RBP10.95□□□□□ -0.66
CDH1-206ENST00000564676 HES2Q9Y543 173 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 CHD7Q9P2D1 2997 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 CHD9Q3L8U1 2897 aa10.95□□□□□ -0.66
CDH1-206ENST00000564676 MYH15Q9Y2K3 1946 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 PHLPP2Q6ZVD8 1323 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 SLC16A4O15374 487 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 CUTAO60888 179 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 TBCAO75347 108 aaKnown RBP10.94□□□□□ -0.66
CDH1-206ENST00000564676 BRD1O95696 1058 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 ITGB1P05556 798 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 STAT6P42226 847 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 ALDH7A1P49419 539 aaKnown RBP10.94□□□□□ -0.66
CDH1-206ENST00000564676 TIGD5Q53EQ6 642 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 ARSHQ5FYA8 562 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 NT5DC1Q5TFE4 455 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 ATF7IP2Q5U623 682 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 KCNT2Q6UVM3 1135 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 SV2BQ7L1I2 683 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 APBB1IPQ7Z5R6 666 aaPredicted RBP10.94□□□□□ -0.66
CDH1-206ENST00000564676 MYCT1Q8N699 235 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 PDILTQ8N807 584 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 SPPL3Q8TCT6 385 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 KCNG4Q8TDN1 519 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 POF1BQ8WVV4 589 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 SPIRE2Q8WWL2 714 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 GAD1Q99259 594 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 REEP2Q9BRK0 252 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 NTPCRQ9BSD7 190 aaKnown RBP10.94□□□□□ -0.66
CDH1-206ENST00000564676 GBP3Q9H0R5 595 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 NXF3Q9H4D5 531 aaKnown RBP10.94□□□□□ -0.66
CDH1-206ENST00000564676 PDZD7Q9H5P4 517 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 PRDM6Q9NQX0 595 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 TBC1D13Q9NVG8 400 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 LARSQ9P2J5 1176 aaKnown RBP10.94□□□□□ -0.66
CDH1-206ENST00000564676 KANSL3Q9P2N6 904 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 STK17AQ9UEE5 414 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 PARP2Q9UGN5 583 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 ODF2LQ9ULJ1 636 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 GIT1Q9Y2X7 761 aa10.94□□□□□ -0.66
CDH1-206ENST00000564676 COL4A4P53420 1690 aaPredicted RBP10.94□□□□□ -0.66
CDH1-206ENST00000564676 KIAA1671Q9BY89 1806 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 CDH23Q9H251 3354 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 TTLL13PA6NNM8 815 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 H0YCG3 227 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 ZC3H11AO75152 810 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDH1-206ENST00000564676 FGF18O76093 207 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 POMCP01189 267 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 AKAP5P24588 427 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 PPM1AP35813 382 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 PBX3P40426 434 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 ME1P48163 572 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 BCAR1P56945 870 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 KRT17Q04695 432 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 STRN3Q13033 797 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 GIT2Q14161 759 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 EEF1DP3Q658K8 133 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDH1-206ENST00000564676 MICAL1Q8TDZ2 1067 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 MRPL4Q9BYD3 311 aaKnown RBP10.93□□□□□ -0.66
CDH1-206ENST00000564676 NSUN3Q9H649 340 aaKnown RBP10.93□□□□□ -0.66
CDH1-206ENST00000564676 NRDE2Q9H7Z3 1164 aa10.93□□□□□ -0.66
CDH1-206ENST00000564676 PARVGQ9HBI0 331 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms