RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 APOL6Q9BWW8 343 aa20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 HES2Q9Y543 173 aa20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 MYH11P35749 1972 aa20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 K7ERI5 159 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 ACKR2O00590 384 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 N4BP3O15049 544 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 POMCP01189 267 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 PLA2G4BP0C869 781 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 PEX3P56589 373 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 ERVFC1P60507 584 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 LEXMQ3ZCV2 418 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 FAM173BQ6P4H8 233 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 RBM23Q86U06 439 aaKnown RBP20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 ADAMTS19Q8TE59 1207 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 TMEM169Q96HH4 297 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 ADPGKQ9BRR6 497 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 KIFC3Q9BVG8 833 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 RNF39Q9H2S5 420 aa20.24■□□□□ 0.83
SYNGR3-204ENST00000564642 GALTP07902 379 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 GUCY2CP25092 1073 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 GTF2F1P35269 517 aaKnown RBP eCLIP20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 NRIP1P48552 1158 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 CEBPZQ03701 1054 aaKnown RBP20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 GRIN1Q05586 938 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 DMP1Q13316 513 aaPredicted RBP20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 BMS1Q14692 1282 aaKnown RBP20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 TMEM119Q4V9L6 283 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 TMC7Q7Z402 723 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 ADGRD2Q7Z7M1 963 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 ZNF280BQ86YH2 543 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 GAD1Q99259 594 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 TCF25Q9BQ70 676 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 CCDC113Q9H0I3 377 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 NXF3Q9H4D5 531 aaKnown RBP20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 TLE6Q9H808 572 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 C17orf75Q9HAS0 396 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 ENTPD7Q9NQZ7 604 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 KCND2Q9NZV8 630 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 PARP2Q9UGN5 583 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 KCNG1Q9UIX4 513 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 GIT1Q9Y2X7 761 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 PCDHGC5Q9Y5F6 944 aa20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 TDRD15B5MCY1 1934 aaKnown RBP20.23■□□□□ 0.83
SYNGR3-204ENST00000564642 ARL5CA6NH57 179 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 H3BQ06 376 aaPredicted RBP20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 TNFRSF10AO00220 468 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 ALDH2P05091 517 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 PDIA4P13667 645 aaKnown RBP20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 AKAP5P24588 427 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 MARCKSP29966 332 aaPredicted RBP20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 MLH1P40692 756 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 NPTX2P47972 431 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 AFF1P51825 1210 aaKnown RBP20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 SLC12A3P55017 1021 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 RAD51AP2Q09MP3 1159 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 COL19A1Q14993 1142 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 PTPAQ15257 358 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 CTC1Q2NKJ3 1217 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 PLPP4Q5VZY2 271 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 UHRF1Q96T88 793 aaPredicted RBP20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 PDZD7Q9H5P4 517 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 NGRNQ9NPE2 291 aaKnown RBP20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 KMT5AQ9NQR1 393 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 DNAJB4Q9UDY4 337 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 FAN1Q9Y2M0 1017 aa20.22■□□□□ 0.83
SYNGR3-204ENST00000564642 TTLL13PA6NNM8 815 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 SFI1A8K8P3 1242 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 FSCN2O14926 492 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 DDHD2O94830 711 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 ADAM15Q13444 863 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 KARSQ15046 597 aaKnown RBP20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 PUS10Q3MIT2 529 aaKnown RBP20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 DAW1Q8N136 415 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 IGSF21Q96ID5 467 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 TMEM175Q9BSA9 504 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 CCSER1Q9C0I3 900 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 TMEM134Q9H6X4 195 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 DAXXQ9UER7 740 aaPredicted RBP20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 USP20Q9Y2K6 914 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 RBM19Q9Y4C8 960 aaKnown RBP20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 SRPRBQ9Y5M8 271 aaKnown RBP20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 PHLPP2Q6ZVD8 1323 aa20.21■□□□□ 0.83
SYNGR3-204ENST00000564642 PER2O15055 1255 aa20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 CA8P35219 290 aa20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 SLC11A1P49279 550 aa20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 NDUFV1P49821 464 aa20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 MAPK7Q13164 816 aa20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 DHX8Q14562 1220 aaKnown RBP20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 ATF7IP2Q5U623 682 aa20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 PTCRAQ6ISU1 281 aaPredicted RBP20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 APBB1IPQ7Z5R6 666 aaPredicted RBP20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 EFHBQ8N7U6 833 aa20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 ZFP42Q96MM3 310 aa20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 CDCA3Q99618 268 aaPredicted RBP20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 KLK14Q9P0G3 267 aa20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 CCDC39Q9UFE4 941 aa20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 FBXO2Q9UK22 296 aaPredicted RBP20.2■□□□□ 0.82
SYNGR3-204ENST00000564642 MYH15Q9Y2K3 1946 aa20.19■□□□□ 0.82
SYNGR3-204ENST00000564642 FSD2A1L4K1 749 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms