RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 TMEM51Q9NW97 253 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 BCCIPQ9P287 314 aaKnown RBP eCLIP8.22□□□□□ -1.09
ATXN3-249ENST00000564606 SALL4Q9UJQ4 1053 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 GTF3C4Q9UKN8 822 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 PRR12Q9ULL5 1215 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 GRIN2DO15399 1336 aa8.22□□□□□ -1.09
ATXN3-249ENST00000564606 TAF1P21675 1872 aa8.21□□□□□ -1.09
ATXN3-249ENST00000564606 CDK5RAP2Q96SN8 1893 aa8.21□□□□□ -1.09
ATXN3-249ENST00000564606 FAM86B1E9PN63 330 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 IPO5O00410 1097 aaKnown RBP8.21□□□□□ -1.1
ATXN3-249ENST00000564606 ATP2A1O14983 1001 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 CHUKO15111 745 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 TRAPPC3O43617 180 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 SPOPO43791 374 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 EDIL3O43854 480 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 STAM2O75886 525 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 SLITRK3O94933 977 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 ECEL1O95672 775 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 FAM86B2P0C5J1 330 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 ACTN1P12814 892 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 RARGP13631 454 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 EZRP15311 586 aaKnown RBP8.21□□□□□ -1.1
ATXN3-249ENST00000564606 STAT3P40763 770 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 QARSP47897 775 aaKnown RBP8.21□□□□□ -1.1
ATXN3-249ENST00000564606 DNA2P51530 1060 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 KCNQ4P56696 695 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 PRSS12P56730 875 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 MCCD1P59942 119 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-249ENST00000564606 ERVK-9P63128 1117 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 PPATQ06203 517 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 TTLL12Q14166 644 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-249ENST00000564606 EZH2Q15910 746 aaKnown RBP8.21□□□□□ -1.1
ATXN3-249ENST00000564606 WDR44Q5JSH3 913 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 KCTD16Q68DU8 428 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 DUPD1Q68J44 220 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 KRT39Q6A163 491 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 FAM83AQ86UY5 434 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 GLYCTKQ8IVS8 523 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 CCDC105Q8IYK2 499 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 SEPT12Q8IYM1 358 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 PRPF38AQ8NAV1 312 aaKnown RBP8.21□□□□□ -1.1
ATXN3-249ENST00000564606 CCDC197Q8NCU1 140 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 MAGEC3Q8TD91 643 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 SLCO2A1Q92959 643 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 MAGOHBQ96A72 148 aaKnown RBP8.21□□□□□ -1.1
ATXN3-249ENST00000564606 LENG9Q96B70 501 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 ARL8AQ96BM9 186 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 BORCS6Q96GS4 357 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 CCDC114Q96M63 670 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 NT5C1BQ96P26 610 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 TRERF1Q96PN7 1200 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 VCPKMTQ9H867 229 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 MRPL47Q9HD33 250 aaKnown RBP8.21□□□□□ -1.1
ATXN3-249ENST00000564606 SIX2Q9NPC8 291 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 WHRNQ9P202 907 aa8.21□□□□□ -1.1
ATXN3-249ENST00000564606 GREB1LQ9C091 1923 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-249ENST00000564606 IGLV3-22A0A075B6J6 115 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 NPHP3-ACAD11A0A0J9YXS1 232 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 C5orf60A6NFR6 353 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 WDR64B1ANS9 1081 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 SMAPO00193 183 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 CLIC2O15247 247 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 DAPK3O43293 454 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 TGFB1I1O43294 461 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 ECE2O60344 883 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 BUB1BO60566 1050 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 LDHAP00338 332 aaKnown RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 GH2P01242 217 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 ICAM1P05362 532 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 HPDP32754 393 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 ATP1A2P50993 1020 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 CYP2J2P51589 502 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 AP3M2P53677 418 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 PSMC5P62195 406 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 GTF2BQ00403 316 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 GHRHRQ02643 423 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 CYP4A11Q02928 519 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 CENPCQ03188 943 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 ACTN3Q08043 901 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 ZNF844Q08AG5 666 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 DMP1Q13316 513 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 TNFAIP1Q13829 316 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 DLGAP5Q15398 846 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 PPP1R7Q15435 360 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 DACT2Q5SW24 774 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 PPP1R21Q6ZMI0 780 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 NLRX1Q86UT6 975 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 JAMLQ86YT9 394 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 DHX37Q8IY37 1157 aaKnown RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 C4orf19Q8IY42 314 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 EXOC8Q8IYI6 725 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 RTKN2Q8IZC4 609 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 CERS5Q8N5B7 392 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 CCDC89Q8N998 374 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 C12orf50Q8NA57 414 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 MCPH1Q8NEM0 835 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 IPO4Q8TEX9 1081 aaKnown RBP8.2□□□□□ -1.1
ATXN3-249ENST00000564606 DYDC1Q8WWB3 177 aa8.2□□□□□ -1.1
ATXN3-249ENST00000564606 ATP6V0A1Q93050 837 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms