RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 ST20-MTHFSA0A0A6YYL1 179 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 WNT10BO00744 389 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 MTSS1O43312 755 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 FSBPO95073 299 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 NUDT3O95989 172 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 HSD3B2P26439 372 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 LGALS4P56470 323 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 TOB2Q14106 344 aaPredicted RBP4.33□□□□□ -1.72
CHD9-211ENST00000564600 UBE3CQ15386 1083 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 MBNL2Q5VZF2 373 aaKnown RBP4.33□□□□□ -1.72
CHD9-211ENST00000564600 DDX46Q7L014 1031 aaKnown RBP4.33□□□□□ -1.72
CHD9-211ENST00000564600 HDGFL2Q7Z4V5 671 aaPredicted RBP4.33□□□□□ -1.72
CHD9-211ENST00000564600 C11orf74Q86VG3 221 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 GLCCI1Q86VQ1 547 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 THEMISQ8N1K5 641 aaPredicted RBP4.33□□□□□ -1.72
CHD9-211ENST00000564600 AFAP1L2Q8N4X5 818 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 NTN5Q8WTR8 489 aaPredicted RBP4.33□□□□□ -1.72
CHD9-211ENST00000564600 USP7Q93009 1102 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 MLST8Q9BVC4 326 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 CPEB1Q9BZB8 566 aaKnown RBP4.33□□□□□ -1.72
CHD9-211ENST00000564600 KCTD10Q9H3F6 313 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 IFT22Q9H7X7 185 aa4.33□□□□□ -1.72
CHD9-211ENST00000564600 NOC2LQ9Y3T9 749 aaKnown RBP4.33□□□□□ -1.72
CHD9-211ENST00000564600 GRXCR1A8MXD5 290 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 HOXA3O43365 443 aaPredicted RBP4.32□□□□□ -1.72
CHD9-211ENST00000564600 IGSF3O75054 1194 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 RAB11FIP3O75154 756 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 EYA4O95677 639 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 HK1P19367 917 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 POU3F3P20264 500 aaPredicted RBP4.32□□□□□ -1.72
CHD9-211ENST00000564600 CANXP27824 592 aaKnown RBP4.32□□□□□ -1.72
CHD9-211ENST00000564600 NPEPPSP55786 919 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 MAN2A1Q16706 1144 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 CCDC142Q17RM4 750 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 XYLT1Q86Y38 959 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 MDGA1Q8NFP4 955 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 TGFBRAP1Q8WUH2 860 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 ATXN2LQ8WWM7 1075 aaKnown RBP4.32□□□□□ -1.72
CHD9-211ENST00000564600 TTC1Q99614 292 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 LSM14BQ9BX40 385 aaKnown RBP4.32□□□□□ -1.72
CHD9-211ENST00000564600 GPR87Q9BY21 358 aa4.32□□□□□ -1.72
CHD9-211ENST00000564600 ZMYM3Q14202 1370 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.31□□□□□ -1.72
CHD9-211ENST00000564600 NR4A1P22736 598 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 MAN2A2P49641 1150 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 MRPS21P82921 87 aaKnown RBP4.31□□□□□ -1.72
CHD9-211ENST00000564600 HTR3DQ70Z44 454 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 TAS1R1Q7RTX1 841 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 GSPT2Q8IYD1 628 aaKnown RBP4.31□□□□□ -1.72
CHD9-211ENST00000564600 ANKRD35Q8N283 1001 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 OR5M3Q8NGP4 307 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 OR14C36Q8NHC7 312 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 ARL8AQ96BM9 186 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 MNTQ99583 582 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 CAAP1Q9H8G2 361 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 TMA7Q9Y2S6 64 aaKnown RBP4.31□□□□□ -1.72
CHD9-211ENST00000564600 CDY2AQ9Y6F7 541 aa4.31□□□□□ -1.72
CHD9-211ENST00000564600 MASP2O00187 686 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 MAFGO15525 162 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 ZEB2O60315 1214 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 ZFP36P26651 326 aaKnown RBP4.3□□□□□ -1.72
CHD9-211ENST00000564600 GPR15P49685 360 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 CCT2P78371 535 aaKnown RBP4.3□□□□□ -1.72
CHD9-211ENST00000564600 STAT4Q14765 748 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 ANKS6Q68DC2 871 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 LMBR1LQ6UX01 489 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 MRGPREQ86SM8 312 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 TSPEARQ8WU66 669 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 ST8SIA2Q92186 375 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 PRRX2Q99811 253 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 DPP7Q9UHL4 492 aa4.3□□□□□ -1.72
CHD9-211ENST00000564600 CYP27B1O15528 508 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 ADCY6O43306 1168 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 PRAMEF4O60810 478 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 ZNF37AP17032 561 aaPredicted RBP4.29□□□□□ -1.72
CHD9-211ENST00000564600 ENPP1P22413 925 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 CTSSP25774 331 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 ADRA1BP35368 520 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 SCAND1P57086 179 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 SESN3P58005 492 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 TMPRSS15P98073 1019 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 CDK17Q00537 523 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 MRPL49Q13405 166 aaKnown RBP4.29□□□□□ -1.72
CHD9-211ENST00000564600 CNGB1Q14028 1251 aaPredicted RBP4.29□□□□□ -1.72
CHD9-211ENST00000564600 FSCN1Q16658 493 aaKnown RBP4.29□□□□□ -1.72
CHD9-211ENST00000564600 UGT8Q16880 541 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 CCDC178Q5BJE1 867 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 GLB1L2Q8IW92 636 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 COG1Q8WTW3 980 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 CHAC2Q8WUX2 184 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 LMBR1Q8WVP7 490 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 CEP95Q96GE4 821 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 CPPED1Q9BRF8 314 aaPredicted RBP4.29□□□□□ -1.72
CHD9-211ENST00000564600 ZNF768Q9H5H4 540 aaKnown RBP4.29□□□□□ -1.72
CHD9-211ENST00000564600 AURKAIP1Q9NWT8 199 aaPredicted RBP4.29□□□□□ -1.72
CHD9-211ENST00000564600 TRPS1Q9UHF7 1281 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 ZNHIT2Q9UHR6 403 aa4.29□□□□□ -1.72
CHD9-211ENST00000564600 APOBEC2Q9Y235 224 aaKnown RBP4.29□□□□□ -1.72
CHD9-211ENST00000564600 TMEM191CA6NGB0 347 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 MFAP3LO75121 409 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms