RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 RPLP2P05387 115 aaKnown RBP3.21□□□□□ -1.9
CHD9-209ENST00000564255 TYRP14679 529 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 RAB1AP62820 205 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 ZNF200P98182 395 aaPredicted RBP3.21□□□□□ -1.9
CHD9-209ENST00000564255 CDC42EP1Q00587 391 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 MGAT5Q09328 741 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 ADAM9Q13443 819 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 NOMO1Q15155 1222 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 MAN2A1Q16706 1144 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 C1orf228Q6PIY5 440 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 APBB1IPQ7Z5R6 666 aaPredicted RBP3.21□□□□□ -1.9
CHD9-209ENST00000564255 TP53INP2Q8IXH6 220 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 UNC5BQ8IZJ1 945 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 APIPQ96GX9 242 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 DYDC2Q96IM9 177 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 CCDC138Q96M89 665 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 SAMD11Q96NU1 681 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 TACO1Q9BSH4 297 aaKnown RBP3.21□□□□□ -1.9
CHD9-209ENST00000564255 ZFP69BQ9UJL9 534 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 PCDHA13Q9Y5I0 950 aa3.21□□□□□ -1.9
CHD9-209ENST00000564255 RPTORQ8N122 1335 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 ENDOD1O94919 500 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 WNT11O96014 354 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 COL6A1P12109 1028 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 PAX3P23760 479 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 VIPR1P32241 457 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 HALP42357 657 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 CD69Q07108 199 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 LCE3BQ5TA77 95 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 GRAMD4Q6IC98 578 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 ABHD15Q6UXT9 468 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 TMC6Q7Z403 805 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 ACRBPQ8NEB7 543 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 IL31RAQ8NI17 732 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 SNX33Q8WV41 574 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 WRNIP1Q96S55 665 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 WDR12Q9GZL7 423 aaKnown RBP3.2□□□□□ -1.9
CHD9-209ENST00000564255 EPB41L4AQ9HCS5 686 aaPredicted RBP3.2□□□□□ -1.9
CHD9-209ENST00000564255 RTEL1Q9NZ71 1219 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 FBXO10Q9UK96 956 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 SIK3Q9Y2K2 1263 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 CCDC189A1A4V9 331 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 CFAP69A5D8W1 941 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.2□□□□□ -1.9
CHD9-209ENST00000564255 FOXN3O00409 490 aaPredicted RBP3.2□□□□□ -1.9
CHD9-209ENST00000564255 PHGDHO43175 533 aaKnown RBP3.2□□□□□ -1.9
CHD9-209ENST00000564255 PHF2O75151 1096 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 FSBPO95073 299 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 PAPLNO95428 1278 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 CYP2C8P10632 490 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 ATF2P15336 505 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 GLRBP48167 497 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 MAP3K12Q12852 859 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 TARDBPQ13148 414 aaKnown RBP eCLIP3.2□□□□□ -1.91e-7■■■■□ 25.2
CHD9-209ENST00000564255 STK3Q13188 491 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 RAPGEF1Q13905 1077 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 RTP5Q14D33 572 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 OLFML2BQ68BL8 750 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 TMED8Q6PL24 325 aaPredicted RBP3.2□□□□□ -1.9
CHD9-209ENST00000564255 LMBR1LQ6UX01 489 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 CBLL1Q75N03 491 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 B3GNT8Q7Z7M8 397 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 SAPCD2Q86UD0 394 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 NKAPQ8N5F7 415 aaKnown RBP3.2□□□□□ -1.9
CHD9-209ENST00000564255 OR2C3Q8N628 320 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 STPG3Q8N7X2 389 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 PIK3C3Q8NEB9 887 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 DDX11Q96FC9 970 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 CLPTM1LQ96KA5 538 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 C7orf25Q9BPX7 421 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.2□□□□□ -1.9
CHD9-209ENST00000564255 LRRC27Q9C0I9 530 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 MANSC1Q9H8J5 431 aa3.2□□□□□ -1.9
CHD9-209ENST00000564255 A0A0G2JNJ9 132 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 MYO1FO00160 1098 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 TBX3O15119 743 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 GAAP10253 952 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 TRAPPC10P48553 1259 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 PRIM2P49643 509 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 ZNF543Q08ER8 600 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 MST1LQ2TV78 715 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 Q6ZVL8 140 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 LINC00482Q8N8I6 264 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 VPS37AQ8NEZ2 397 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 WDR48Q8TAF3 677 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 PNISRQ8TF01 805 aaKnown RBP3.19□□□□□ -1.9
CHD9-209ENST00000564255 POF1BQ8WVV4 589 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 APOL5Q9BWW9 433 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 MAF1Q9H063 256 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 ZMAT3Q9HA38 289 aaKnown RBP3.19□□□□□ -1.9
CHD9-209ENST00000564255 PNPOQ9NVS9 261 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 Q9UFV3 132 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 MAGEL2Q9UJ55 1249 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 PADI4Q9UM07 663 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 PCDHA5Q9Y5H7 936 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 LRRC14BA6NHZ5 514 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 EIF5BO60841 1220 aaKnown RBP3.19□□□□□ -1.9
CHD9-209ENST00000564255 KNG1P01042 644 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 GLI1P08151 1106 aa3.19□□□□□ -1.9
CHD9-209ENST00000564255 IGFBP6P24592 240 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms