RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 XKR3Q5GH77 459 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 FAM26DQ5JW98 314 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 ODR4Q5SWX8 454 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 ANKRD40Q6AI12 368 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 CCDC186Q7Z3E2 898 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 TMC6Q7Z403 805 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 VSTM4Q8IW00 320 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 EXOC8Q8IYI6 725 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 MYCT1Q8N699 235 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 CCDC112Q8NEF3 446 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 KIFAP3Q92845 792 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 IQCDQ96DY2 449 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 FAM167AQ96KS9 214 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 ASB2Q96Q27 587 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 AGO3Q9H9G7 860 aaKnown RBP10.69□□□□□ -0.7
UBFD1-203ENST00000564106 ZNF302Q9NR11 478 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 CGNQ9P2M7 1197 aaKnown RBP10.69□□□□□ -0.7
UBFD1-203ENST00000564106 WRAP73Q9P2S5 460 aaPredicted RBP10.69□□□□□ -0.7
UBFD1-203ENST00000564106 RAPGEFL1Q9UHV5 662 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 PCDHA2Q9Y5H9 948 aa10.69□□□□□ -0.7
UBFD1-203ENST00000564106 EVPLQ92817 2033 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 IGKV6D-21A0A0A0MT36 114 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 NPHP3-ACAD11A0A0J9YXS1 232 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 ABHD14A-ACY1A0A1B0GW23 586 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 MBLAC1A4D2B0 266 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 GCNT3O95395 438 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 BMP1P13497 986 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 ATP4AP20648 1035 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 SFPQP23246 707 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 DNM2P50570 870 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 COPB1P53618 953 aaKnown RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 SMTNP53814 917 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 ERVK-21P61565 698 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 IGBP1P78318 339 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 HTRA4P83105 476 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 PRKCEQ02156 737 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 CACNB1Q02641 598 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 PPP2R3AQ06190 1150 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 TMEM62Q0P6H9 643 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 PPFIA1Q13136 1202 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 NR1I3Q14994 352 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 KRT31Q15323 416 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 GRIK4Q16099 956 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 KNOP1Q1ED39 458 aaKnown RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 HSP90AA4PQ58FG1 418 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 EPM2AIP1Q7L775 607 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 FILIP1Q7Z7B0 1213 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 ZNF507Q8TCN5 953 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 SP7Q8TDD2 431 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 ADAMTS19Q8TE59 1207 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 SCFD1Q8WVM8 642 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 DNAJB3Q8WWF6 145 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 SEPT1Q8WYJ6 367 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 KHSRPQ92945 711 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 HPS3Q969F9 1004 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 HVCN1Q96D96 273 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 CNOT6LQ96LI5 555 aaKnown RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 DUSP9Q99956 384 aaKnown RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 AZI2Q9H6S1 392 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 TMEM206Q9H813 350 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 RC3H2Q9HBD1 1191 aaKnown RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 RTN4Q9NQC3 1192 aaKnown RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 TYW1Q9NV66 732 aaKnown RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 TRAF3IP3Q9Y228 551 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 MAFBQ9Y5Q3 323 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-203ENST00000564106 RALGAPA2Q2PPJ7 1873 aa10.68□□□□□ -0.7
UBFD1-203ENST00000564106 TTC3P53804 2025 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 EMSYQ7Z589 1322 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 A0A1W2PQC6 194 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 LGALS16A8MUM7 142 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 ZBTB42B2RXF5 422 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 CETN3O15182 167 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 USO1O60763 962 aaKnown RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 HIP1RO75146 1068 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 UPP2O95045 317 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 PLS3P13797 630 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 INSRRP14616 1297 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 RFC5P40937 340 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 MTIF2P46199 727 aaKnown RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 PMS1P54277 932 aaKnown RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 MARSP56192 900 aaKnown RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 SNRPFP62306 86 aaKnown RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 IKBKEQ14164 716 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 HSP90AA2PQ14568 343 aaPredicted RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 PLCB4Q15147 1175 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 NFIL3Q16649 462 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 UGCGQ16739 394 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 FKBP15Q5T1M5 1219 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 ANO5Q75V66 913 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 HS2ST1Q7LGA3 356 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 APTXQ7Z2E3 356 aaKnown RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 RTN4RL1Q86UN2 441 aaPredicted RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 CCDC60Q8IWA6 550 aaPredicted RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 CEP170P1Q96L14 293 aa10.67□□□□□ -0.7
UBFD1-203ENST00000564106 NAP1L5Q96NT1 182 aaPredicted RBP10.67□□□□□ -0.7
UBFD1-203ENST00000564106 RAD9AQ99638 391 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms