RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 GAS8O95995 478 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 CAPN1P07384 714 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 CHRNB1P11230 501 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 XRCC5P13010 732 aaKnown RBP6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 HCLS1P14317 486 aaPredicted RBP6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 CDH3P22223 829 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 MAPK9P45984 424 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 GDI2P50395 445 aaKnown RBP6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 CYP4F2P78329 520 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 KRT76Q01546 638 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 CYP4F3Q08477 520 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 GRSF1Q12849 480 aaKnown RBP eCLIP6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 PTK2BQ14289 1009 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 RALYLQ86SE5 291 aaKnown RBP6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 ZNF540Q8NDQ6 660 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 RUBCNQ92622 972 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 TESK2Q96S53 571 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 SLF1Q9BQI6 1058 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 INTS2Q9H0H0 1204 aaKnown RBP6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 CCDC87Q9NVE4 849 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 SIRT5Q9NXA8 310 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 COMMD3-BMI1R4GMX3 469 aa6.33□□□□□ -1.4
TUBGCP4-207ENST00000563963 ROBO1Q9Y6N7 1651 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 FAM47E-STBD1D6RA91 191 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 SLC3A2P08195 630 aaKnown RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 HPGDP15428 266 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 PTGS1P23219 599 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 RENBPP51606 427 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 OTUD4Q01804 1114 aaKnown RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 ACY1Q03154 408 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 TMEM259Q4ZIN3 620 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 USP51Q70EK9 711 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 RHOUQ7L0Q8 258 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 LENG1Q96BZ8 264 aaPredicted RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 HGH1Q9BTY7 390 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 LSM14BQ9BX40 385 aaKnown RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 NT5C3AQ9H0P0 336 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 ZC4H2Q9NQZ6 224 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 SAMD15Q9P1V8 674 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 PLEKHG1Q9ULL1 1385 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 TET3O43151 1660 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 LOC105371267A0A1B0GV96 52 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 LRRIQ4A6NIV6 560 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 B4GALT4O60513 344 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 DGKIO75912 1065 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 ITGB1P05556 798 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 LSP1P33241 339 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 STAT2P52630 851 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 PICALMQ13492 652 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 TRPC3Q13507 836 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 SPCS2Q15005 226 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 BMP2KLQ5H9B9 411 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 TBC1D9BQ66K14 1250 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 TMEM214Q6NUQ4 689 aaKnown RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 GGT6Q6P531 493 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 PLEKHM3Q6ZWE6 761 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 PLA2G4DQ86XP0 818 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 C7orf61Q8IZ16 206 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 IPMKQ8NFU5 416 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 OR6C4Q8NGE1 309 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 FERMT2Q96AC1 680 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 CCDC138Q96M89 665 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 DESI2Q9BSY9 194 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 TMEM206Q9H813 350 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 L2HGDHQ9H9P8 463 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 SLC38A10Q9HBR0 1119 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 CRLF2Q9HC73 371 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 POLE3Q9NRF9 147 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 EIF2B4Q9UI10 523 aaKnown RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 SNCAIPQ9Y6H5 919 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 TMEM2Q9UHN6 1383 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 ST8SIA5O15466 376 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 CCDC192P0DO97 292 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 ARF4P18085 180 aaPredicted RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 AXLP30530 894 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 KRT2P35908 639 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 ABCG1P45844 678 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 POLR2GP62487 172 aaKnown RBP eCLIP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 MRPS5P82675 430 aaKnown RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 PLOD1Q02809 727 aaPredicted RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 CEBPZQ03701 1054 aaKnown RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 IFIT5Q13325 482 aaKnown RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 TTF1Q15361 905 aaPredicted RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 TRAPPC3LQ5T215 181 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 FUKQ8N0W3 1084 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 PGBD3Q8N328 593 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 ZNF565Q8N9K5 539 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 NUDT12Q9BQG2 462 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 NTN4Q9HB63 628 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 NOD2Q9HC29 1040 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 NLRC4Q9NPP4 1024 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 IQGAP3Q86VI3 1631 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 XIRP1Q702N8 1843 aaKnown RBP6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 PIK3C2BO00750 1634 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 TMEM94Q12767 1356 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 KIF24Q5T7B8 1368 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 PITPNM2Q9BZ72 1349 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 CAPN14A8MX76 684 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 CAPNS1P04632 268 aa6.32□□□□□ -1.4
TUBGCP4-207ENST00000563963 PYGMP11217 842 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms