RNA–Protein interactions for RNA: ENST00000563857.1

RNPS1-208, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 2

Gene RNPS1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-208ENST00000563857 PABPC5Q96DU9 382 aaKnown RBP17.69■□□□□ 0.42
RNPS1-208ENST00000563857 CPB2Q96IY4 423 aa17.69■□□□□ 0.42
RNPS1-208ENST00000563857 MRPL4Q9BYD3 311 aaKnown RBP17.69■□□□□ 0.42
RNPS1-208ENST00000563857 TBC1D13Q9NVG8 400 aa17.69■□□□□ 0.42
RNPS1-208ENST00000563857 COL4A4P53420 1690 aaPredicted RBP17.68■□□□□ 0.42
RNPS1-208ENST00000563857 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.68■□□□□ 0.42
RNPS1-208ENST00000563857 PPP6R2O75170 966 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 NPTXRO95502 500 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 NPTX2P47972 431 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 SLC12A3P55017 1021 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 BCAR1P56945 870 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 RRAGBQ5VZM2 374 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 LRRC55Q6ZSA7 311 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 SLC39A11Q8N1S5 342 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 LARP4BQ92615 738 aaKnown RBP17.68■□□□□ 0.42
RNPS1-208ENST00000563857 RAD54LQ92698 747 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 LPPQ93052 612 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 RPS6KC1Q96S38 1066 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 CCDC113Q9H0I3 377 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 UBE2ZQ9H832 354 aaPredicted RBP17.68■□□□□ 0.42
RNPS1-208ENST00000563857 SSX2IPQ9Y2D8 614 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 FAN1Q9Y2M0 1017 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 ATP6V1DQ9Y5K8 247 aa17.68■□□□□ 0.42
RNPS1-208ENST00000563857 SPTLC2O15270 562 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 ZC3H11AO75152 810 aaKnown RBP eCLIP17.67■□□□□ 0.42
RNPS1-208ENST00000563857 TBCAO75347 108 aaKnown RBP17.67■□□□□ 0.42
RNPS1-208ENST00000563857 LIG1P18858 919 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 MARCKSP29966 332 aaPredicted RBP17.67■□□□□ 0.42
RNPS1-208ENST00000563857 CEBPZQ03701 1054 aaKnown RBP17.67■□□□□ 0.42
RNPS1-208ENST00000563857 ATF7IP2Q5U623 682 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 KCNK18Q7Z418 384 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 GPBP1Q86WP2 473 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 SMG8Q8ND04 991 aaKnown RBP17.67■□□□□ 0.42
RNPS1-208ENST00000563857 KCNG4Q8TDN1 519 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 BSNDQ8WZ55 320 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 USP28Q96RU2 1077 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 PLIN2Q99541 437 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 RUSC1Q9BVN2 902 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 COLEC11Q9BWP8 271 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 EIF2AQ9BY44 585 aaKnown RBP17.67■□□□□ 0.42
RNPS1-208ENST00000563857 TLE6Q9H808 572 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 ENTPD7Q9NQZ7 604 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 PARP2Q9UGN5 583 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 FBXO2Q9UK22 296 aaPredicted RBP17.67■□□□□ 0.42
RNPS1-208ENST00000563857 TNFSF13BQ9Y275 285 aa17.67■□□□□ 0.42
RNPS1-208ENST00000563857 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.67■□□□□ 0.42
RNPS1-208ENST00000563857 ARL5CA6NH57 179 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 B4GALT5O43286 388 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 FAM13AO94988 1023 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 F13A1P00488 732 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 PLCG1P19174 1290 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 YARSP54577 528 aaKnown RBP17.66■□□□□ 0.42
RNPS1-208ENST00000563857 SMC1AQ14683 1233 aaKnown RBP17.66■□□□□ 0.42
RNPS1-208ENST00000563857 KYAT1Q16773 422 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 LEXMQ3ZCV2 418 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 SV2BQ7L1I2 683 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 TMC7Q7Z402 723 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 DDX53Q86TM3 631 aaKnown RBP17.66■□□□□ 0.42
RNPS1-208ENST00000563857 LINC00301Q8NCQ3 95 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 KCNN1Q92952 543 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 PYM1Q9BRP8 204 aaKnown RBP17.66■□□□□ 0.42
RNPS1-208ENST00000563857 TCHPQ9BT92 498 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 CCDC94Q9BW85 323 aaPredicted RBP17.66■□□□□ 0.42
RNPS1-208ENST00000563857 NRDE2Q9H7Z3 1164 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 PARVGQ9HBI0 331 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 TOPORSQ9NS56 1045 aaPredicted RBP17.66■□□□□ 0.42
RNPS1-208ENST00000563857 ARHGAP28Q9P2N2 729 aa17.66■□□□□ 0.42
RNPS1-208ENST00000563857 GALTP07902 379 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 GRIK3Q13003 919 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 COL19A1Q14993 1142 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 KARSQ15046 597 aaKnown RBP17.65■□□□□ 0.42
RNPS1-208ENST00000563857 LONRF3Q496Y0 759 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 EP400NLQ6ZTU2 488 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 EFHBQ8N7U6 833 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 IGSF21Q96ID5 467 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 GAD1Q99259 594 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 TCF25Q9BQ70 676 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 APOL6Q9BWW8 343 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 GBP3Q9H0R5 595 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 CUEDC2Q9H467 287 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 PDZD7Q9H5P4 517 aa17.65■□□□□ 0.42
RNPS1-208ENST00000563857 TRANK1O15050 2925 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 FSCN2O14926 492 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 CUTAO60888 179 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 MCF2P10911 925 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 AMPD3Q01432 767 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 MAPK7Q13164 816 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 FAM173BQ6P4H8 233 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 ZPBP2Q6X784 338 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 DAW1Q8N136 415 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 MYCT1Q8N699 235 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 PRDM6Q9NQX0 595 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 CLDND1Q9NY35 253 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 SEL1LQ9UBV2 794 aa17.64■□□□□ 0.41
RNPS1-208ENST00000563857 SLC16A4O15374 487 aa17.63■□□□□ 0.41
RNPS1-208ENST00000563857 POMCP01189 267 aa17.63■□□□□ 0.41
RNPS1-208ENST00000563857 MAPTP10636 758 aaKnown RBP17.63■□□□□ 0.41
RNPS1-208ENST00000563857 GAP43P17677 238 aa17.63■□□□□ 0.41
RNPS1-208ENST00000563857 KCNA5P22460 613 aa17.63■□□□□ 0.41
RNPS1-208ENST00000563857 MLH1P40692 756 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms