RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SBNO2Q9Y2G9 1366 aa6.63□□□□□ -1.35
LINC00254-201ENST00000563416 MROH2AA6NES4 1674 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 AGLP35573 1532 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 MYOM3Q5VTT5 1437 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 C9orf84Q5VXU9 1444 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 MIA2Q96PC5 1412 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 A0A1W2PRX2 142 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 EYA4O95677 639 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 JUNP05412 331 aaKnown RBP6.62□□□□□ -1.35
LINC00254-201ENST00000563416 VSIG10L2P0DP72 767 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 HNRNPLP14866 589 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC00254-201ENST00000563416 COMTP21964 271 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 PPARAQ07869 468 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 RIN1Q13671 783 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 CCDC62Q6P9F0 684 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 LMBR1LQ6UX01 489 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 GLB1L2Q8IW92 636 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 UNC5BQ8IZJ1 945 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 OR14C36Q8NHC7 312 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 Q8TCH9 128 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 GPR20Q99678 358 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 C1QTNF3Q9BXJ4 246 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 CD248Q9HCU0 757 aa6.62□□□□□ -1.35
LINC00254-201ENST00000563416 TOPORSQ9NS56 1045 aaPredicted RBP6.62□□□□□ -1.35
LINC00254-201ENST00000563416 ATP10AO60312 1499 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 CCDC141Q6ZP82 1450 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 A0A0A6YYK5 440 aaPredicted RBP6.61□□□□□ -1.35
LINC00254-201ENST00000563416 GPR39O43194 453 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 TOX4O94842 621 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 CLEC2LP0C7M8 214 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 KIR2DL3P43628 341 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 DUSP8Q13202 625 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 GRM7Q14831 915 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 FSCN1Q16658 493 aaKnown RBP6.61□□□□□ -1.35
LINC00254-201ENST00000563416 ZNF585AQ6P3V2 769 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 PPP1R14CQ8TAE6 165 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 FAM89AQ96GI7 184 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 RPL10LQ96L21 214 aaKnown RBP6.61□□□□□ -1.35
LINC00254-201ENST00000563416 SOX7Q9BT81 388 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 KLC2Q9H0B6 622 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 PLA2G3Q9NZ20 509 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 PRSS50Q9UI38 385 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 RCAN3Q9UKA8 241 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 C3P01024 1663 aa6.61□□□□□ -1.35
LINC00254-201ENST00000563416 EIF2AK4Q9P2K8 1649 aaKnown RBP6.61□□□□□ -1.35
LINC00254-201ENST00000563416 TCOF1Q13428 1488 aaKnown RBP6.6□□□□□ -1.35
LINC00254-201ENST00000563416 MTSS1O43312 755 aa6.6□□□□□ -1.35
LINC00254-201ENST00000563416 SEC24DO94855 1032 aaPredicted RBP6.6□□□□□ -1.35
LINC00254-201ENST00000563416 ZNF20P17024 532 aa6.6□□□□□ -1.35
LINC00254-201ENST00000563416 HHEXQ03014 270 aa6.6□□□□□ -1.35
LINC00254-201ENST00000563416 SPIDRQ14159 915 aa6.6□□□□□ -1.35
LINC00254-201ENST00000563416 PDCD1Q15116 288 aa6.6□□□□□ -1.35
LINC00254-201ENST00000563416 UGT8Q16880 541 aa6.6□□□□□ -1.35
LINC00254-201ENST00000563416 ADGRE4PQ86SQ3 457 aa6.6□□□□□ -1.35
LINC00254-201ENST00000563416 GPR135Q8IZ08 494 aa6.6□□□□□ -1.35
LINC00254-201ENST00000563416 RAX2Q96IS3 184 aa6.6□□□□□ -1.35
LINC00254-201ENST00000563416 PAWRQ96IZ0 340 aaKnown RBP6.6□□□□□ -1.35
LINC00254-201ENST00000563416 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.6□□□□□ -1.35
LINC00254-201ENST00000563416 CFDP1Q9UEE9 299 aaPredicted RBP6.6□□□□□ -1.35
LINC00254-201ENST00000563416 SETD1BQ9UPS6 1966 aaKnown RBP6.6□□□□□ -1.35
LINC00254-201ENST00000563416 RTEL1-TNFRSF6BF6WH68 1400 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 CLTCQ00610 1675 aaKnown RBP6.59□□□□□ -1.35
LINC00254-201ENST00000563416 RNF17Q9BXT8 1623 aaKnown RBP6.59□□□□□ -1.35
LINC00254-201ENST00000563416 GOLGA8AA7E2F4 631 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 NRP1O14786 923 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 MUSKO15146 869 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 GAAP10253 952 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 NCLP19338 710 aaKnown RBP6.59□□□□□ -1.35
LINC00254-201ENST00000563416 ENPP1P22413 925 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 CT83Q5H943 113 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 PITRM1Q5JRX3 1037 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 AHCYL2Q96HN2 611 aaKnown RBP6.59□□□□□ -1.35
LINC00254-201ENST00000563416 MPHOSPH9Q99550 1183 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 KCTD10Q9H3F6 313 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 TMPRSS11EQ9UL52 423 aa6.59□□□□□ -1.35
LINC00254-201ENST00000563416 SHANK2Q9UPX8 1470 aa6.59□□□□□ -1.36
LINC00254-201ENST00000563416 FGD6Q6ZV73 1430 aa6.59□□□□□ -1.36
LINC00254-201ENST00000563416 ZC3H13Q5T200 1668 aaKnown RBP6.58□□□□□ -1.36
LINC00254-201ENST00000563416 PREX1Q8TCU6 1659 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 LY86O95711 162 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 MTHFD2P13995 350 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 MSX2P35548 267 aaPredicted RBP6.58□□□□□ -1.36
LINC00254-201ENST00000563416 CD69Q07108 199 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 MGAT5Q09328 741 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 PRKD1Q15139 912 aaPredicted RBP6.58□□□□□ -1.36
LINC00254-201ENST00000563416 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC00254-201ENST00000563416 AFAP1Q8N556 730 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 EDAQ92838 391 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 TMEM176AQ96HP8 235 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 ADOQ96SZ5 270 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 GPHA2Q96T91 129 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 TCF25Q9BQ70 676 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 IL23AQ9NPF7 189 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 NCDNQ9UBB6 729 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 JAG2Q9Y219 1238 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 TSC22D4Q9Y3Q8 395 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 CDY2AQ9Y6F7 541 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 DEPDC5O75140 1603 aa6.58□□□□□ -1.36
LINC00254-201ENST00000563416 WASHC2AQ641Q2 1341 aa6.57□□□□□ -1.36
LINC00254-201ENST00000563416 ZNF644Q9H582 1327 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms