RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 TIPINQ9BVW5 301 aa31.21■■■□□ 2.59
NME3-203ENST00000563367 APOL6Q9BWW8 343 aa31.21■■■□□ 2.59
NME3-203ENST00000563367 TRIM6Q9C030 488 aaPredicted RBP31.21■■■□□ 2.59
NME3-203ENST00000563367 PDZD7Q9H5P4 517 aa31.21■■■□□ 2.59
NME3-203ENST00000563367 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP31.2■■■□□ 2.59
NME3-203ENST00000563367 NT5C1B-RDH14C9J2C7 533 aa31.2■■■□□ 2.59
NME3-203ENST00000563367 ZSCAN22P10073 491 aaPredicted RBP31.2■■■□□ 2.59
NME3-203ENST00000563367 NASPP49321 788 aaPredicted RBP31.2■■■□□ 2.59
NME3-203ENST00000563367 PKP1Q13835 747 aa31.2■■■□□ 2.59
NME3-203ENST00000563367 ZNF280BQ86YH2 543 aa31.2■■■□□ 2.59
NME3-203ENST00000563367 SLC39A11Q8N1S5 342 aa31.2■■■□□ 2.59
NME3-203ENST00000563367 SPG21Q9NZD8 308 aa31.2■■■□□ 2.59
NME3-203ENST00000563367 TFIP11Q9UBB9 837 aaKnown RBP31.2■■■□□ 2.59
NME3-203ENST00000563367 DNAJB4Q9UDY4 337 aa31.2■■■□□ 2.59
NME3-203ENST00000563367 MORC2Q9Y6X9 1032 aaPredicted RBP31.2■■■□□ 2.59
NME3-203ENST00000563367 ZC3H11AO75152 810 aaKnown RBP eCLIP31.19■■■□□ 2.585e-7■□□□□ 8.5
NME3-203ENST00000563367 ERVFC1P60507 584 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 RNASELQ05823 741 aaKnown RBP31.19■■■□□ 2.58
NME3-203ENST00000563367 HYAL1Q12794 435 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 DMP1Q13316 513 aaPredicted RBP31.19■■■□□ 2.58
NME3-203ENST00000563367 MCM6Q14566 821 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 TJAP1Q5JTD0 557 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 NT5DC1Q5TFE4 455 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 RASSF8Q8NHQ8 419 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 URGCPQ8TCY9 931 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 MRPS27Q92552 414 aaKnown RBP31.19■■■□□ 2.58
NME3-203ENST00000563367 SYMPKQ92797 1274 aaKnown RBP31.19■■■□□ 2.58
NME3-203ENST00000563367 GAD1Q99259 594 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 GBP3Q9H0R5 595 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 UBE2ZQ9H832 354 aaPredicted RBP31.19■■■□□ 2.58
NME3-203ENST00000563367 UBN1Q9NPG3 1134 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 KCND2Q9NZV8 630 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 TRIP11Q15643 1979 aa31.19■■■□□ 2.58
NME3-203ENST00000563367 K7ERI5 159 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 DDHD2O94830 711 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 POMCP01189 267 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 AKAP5P24588 427 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 GTF2F1P35269 517 aaKnown RBP eCLIP31.18■■■□□ 2.584e-7■■■□□ 18.9
NME3-203ENST00000563367 PPM1AP35813 382 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 ALDH7A1P49419 539 aaKnown RBP31.18■■■□□ 2.58
NME3-203ENST00000563367 CACNB1Q02641 598 aaPredicted RBP31.18■■■□□ 2.58
NME3-203ENST00000563367 DHX8Q14562 1220 aaKnown RBP31.18■■■□□ 2.58
NME3-203ENST00000563367 COL19A1Q14993 1142 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 EEF1DP3Q658K8 133 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 ADGRD2Q7Z7M1 963 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 RAD54LQ92698 747 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 C17orf75Q9HAS0 396 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 KMT5AQ9NQR1 393 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 TLR9Q9NR96 1032 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 MIOSQ9NXC5 875 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 ARHGAP28Q9P2N2 729 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 LZTS1Q9Y250 596 aa31.18■■■□□ 2.58
NME3-203ENST00000563367 ARL5CA6NH57 179 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 N4BP3O15049 544 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 INPPL1O15357 1258 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 F13A1P00488 732 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 GALTP07902 379 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 PDIA4P13667 645 aaKnown RBP31.17■■■□□ 2.58
NME3-203ENST00000563367 MLH1P40692 756 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 KCNQ1P51787 676 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 TMEM132AQ24JP5 1023 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 TAS1R3Q7RTX0 852 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 GPBP1Q86WP2 473 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 TMEM173Q86WV6 379 aaPredicted RBP31.17■■■□□ 2.58
NME3-203ENST00000563367 LINC00301Q8NCQ3 95 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 ZFP42Q96MM3 310 aa31.17■■■□□ 2.58
NME3-203ENST00000563367 COL25A1Q9BXS0 654 aaPredicted RBP31.17■■■□□ 2.58
NME3-203ENST00000563367 SLC16A4O15374 487 aa31.16■■■□□ 2.58
NME3-203ENST00000563367 PLS3P13797 630 aa31.16■■■□□ 2.58
NME3-203ENST00000563367 KRI1Q8N9T8 703 aaKnown RBP31.16■■■□□ 2.58
NME3-203ENST00000563367 NTPCRQ9BSD7 190 aaKnown RBP31.16■■■□□ 2.58
NME3-203ENST00000563367 TMEM134Q9H6X4 195 aa31.16■■■□□ 2.58
NME3-203ENST00000563367 KANSL3Q9P2N6 904 aa31.16■■■□□ 2.58
NME3-203ENST00000563367 GIT1Q9Y2X7 761 aa31.16■■■□□ 2.58
NME3-203ENST00000563367 FSCN2O14926 492 aa31.15■■■□□ 2.58
NME3-203ENST00000563367 SLC11A1P49279 550 aa31.15■■■□□ 2.58
NME3-203ENST00000563367 KRT17Q04695 432 aa31.15■■■□□ 2.58
NME3-203ENST00000563367 STK38Q15208 465 aa31.15■■■□□ 2.58
NME3-203ENST00000563367 FOXD4L6Q3SYB3 417 aaPredicted RBP31.15■■■□□ 2.58
NME3-203ENST00000563367 FOXD4L3Q6VB84 417 aaPredicted RBP31.15■■■□□ 2.58
NME3-203ENST00000563367 HACE1Q8IYU2 909 aa31.15■■■□□ 2.58
NME3-203ENST00000563367 MICAL1Q8TDZ2 1067 aa31.15■■■□□ 2.58
NME3-203ENST00000563367 PABPC5Q96DU9 382 aaKnown RBP31.15■■■□□ 2.58
NME3-203ENST00000563367 ZNF396Q96N95 335 aaPredicted RBP31.15■■■□□ 2.58
NME3-203ENST00000563367 REEP2Q9BRK0 252 aa31.15■■■□□ 2.58
NME3-203ENST00000563367 KLK14Q9P0G3 267 aa31.15■■■□□ 2.58
NME3-203ENST00000563367 PUF60Q9UHX1 559 aaKnown RBP31.15■■■□□ 2.58
NME3-203ENST00000563367 RBM19Q9Y4C8 960 aaKnown RBP31.15■■■□□ 2.58
NME3-203ENST00000563367 PHLPP2Q6ZVD8 1323 aa31.15■■■□□ 2.58
NME3-203ENST00000563367 DLL1O00548 723 aa31.14■■■□□ 2.58
NME3-203ENST00000563367 KCNA5P22460 613 aa31.14■■■□□ 2.58
NME3-203ENST00000563367 AAK1Q2M2I8 961 aa31.14■■■□□ 2.58
NME3-203ENST00000563367 ATF7IP2Q5U623 682 aa31.14■■■□□ 2.58
NME3-203ENST00000563367 GSTCDQ8NEC7 633 aa31.14■■■□□ 2.58
NME3-203ENST00000563367 BCL7CQ8WUZ0 217 aaPredicted RBP31.14■■■□□ 2.58
NME3-203ENST00000563367 SPIRE2Q8WWL2 714 aa31.14■■■□□ 2.58
NME3-203ENST00000563367 LARP4BQ92615 738 aaKnown RBP31.14■■■□□ 2.58
NME3-203ENST00000563367 IGFLR1Q9H665 355 aa31.14■■■□□ 2.58
NME3-203ENST00000563367 BMP1P13497 986 aa31.13■■■□□ 2.57
NME3-203ENST00000563367 DDIT3P35638 169 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms