RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 GLUD2P49448 558 aa17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 POU5F1BQ06416 359 aa17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 MXD4Q14582 209 aaPredicted RBP17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 UBXN11Q5T124 520 aa17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 RUFY3Q7L099 469 aa17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 COLGALT2Q8IYK4 626 aa17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 HACE1Q8IYU2 909 aa17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 RNF168Q8IYW5 571 aaPredicted RBP17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 ADSSL1Q8N142 457 aa17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 VAV3Q9UKW4 847 aa17.58■□□□□ 0.4
HERPUD1-205ENST00000562914 CCDC194A0A1B0GVG4 234 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 EML1O00423 815 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 TEX28O15482 410 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 PI15O43692 258 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 EFEMP2O95967 443 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 XBP1P17861 261 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 YWHABP31946 246 aaKnown RBP17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 GBP2P32456 591 aaPredicted RBP17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 OR1G1P47890 313 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 NPEPPSP55786 919 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 DSG1Q02413 1049 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 CREMQ03060 361 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 DSC1Q08554 894 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 EPHA7Q15375 998 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 INF2Q27J81 1249 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 KIAA0319Q5VV43 1072 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 NOTUMQ6P988 496 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 NEK8Q86SG6 692 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 FERMT3Q86UX7 667 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 RNF149Q8NC42 400 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 TMEM143Q96AN5 459 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 MINDY3Q9H8M7 445 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 ZDHHC7Q9NXF8 308 aa17.57■□□□□ 0.4
HERPUD1-205ENST00000562914 ZMYM2Q9UBW7 1377 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 ARL5CA6NH57 179 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 C2CD2LO14523 706 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 SLC37A4O43826 429 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 SRFP11831 508 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 RFX1P22670 979 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 ID4P47928 161 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 AFF1P51825 1210 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 TFDP1Q14186 410 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 EMC2Q15006 297 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 NPY5RQ15761 445 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 IFNLR1Q8IU57 520 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 SMG8Q8ND04 991 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 LXNQ9BS40 222 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 COLEC11Q9BWP8 271 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 ZSWIM4Q9H7M6 989 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 CHST7Q9NS84 486 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 MARCH5Q9NX47 278 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 GIT1Q9Y2X7 761 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 PRG3Q9Y2Y8 225 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 IPPQ9Y573 584 aa17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 ZFP37Q9Y6Q3 630 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-205ENST00000562914 FAM186AA6NE01 2351 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 RIF1Q5UIP0 2472 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 MARCH6O60337 910 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 CDKL5O76039 1030 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 PTENP60484 403 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 TOB2Q14106 344 aaPredicted RBP17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 PHLDB3Q6NSJ2 640 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 SLFN12Q8IYM2 578 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 SLC44A3Q8N4M1 653 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 SMG7Q92540 1137 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 MTRQ99707 1265 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 CSRNP2Q9H175 543 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 FNIP2Q9P278 1114 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 CYP46A1Q9Y6A2 500 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 C2orf16Q68DN1 1984 aa17.55■□□□□ 0.4
HERPUD1-205ENST00000562914 STK25O00506 426 aa17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 TSPAN1O60635 241 aa17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 N4BP1O75113 896 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 MLH1P40692 756 aa17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 USP41Q3LFD5 358 aa17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 XKR9Q5GH70 373 aa17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 ZC3H14Q6PJT7 736 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 FEZF2Q8TBJ5 459 aa17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 GAD1Q99259 594 aa17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 NFKBIZQ9BYH8 718 aa17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 TM6SF1Q9BZW5 370 aa17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 TRIM6Q9C030 488 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 PIDD1Q9HB75 910 aa17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 WRAP73Q9P2S5 460 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 DAXXQ9UER7 740 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-205ENST00000562914 DMDP11532 3685 aa17.53■□□□□ 0.4
HERPUD1-205ENST00000562914 CCNT1O60563 726 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-205ENST00000562914 BAG4O95429 457 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-205ENST00000562914 LMNAP02545 664 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-205ENST00000562914 CFHP08603 1231 aa17.53■□□□□ 0.4
HERPUD1-205ENST00000562914 TAS1R1Q7RTX1 841 aa17.53■□□□□ 0.4
HERPUD1-205ENST00000562914 BORCS6Q96GS4 357 aa17.53■□□□□ 0.4
HERPUD1-205ENST00000562914 PHF20Q9BVI0 1012 aa17.53■□□□□ 0.4
HERPUD1-205ENST00000562914 NT5C3AQ9H0P0 336 aa17.53■□□□□ 0.4
HERPUD1-205ENST00000562914 KRBA1A5PL33 1030 aa17.52■□□□□ 0.4
HERPUD1-205ENST00000562914 INO80B-WBP1J3KQ70 363 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms