RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 EDNRBP24530 442 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 TNFRSF8P28908 595 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 NF2P35240 595 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 DNA2P51530 1060 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 GPC3P51654 580 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 TNNC1P63316 161 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 MAP2K1Q02750 393 aaPredicted RBP23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 CCDC127Q96BQ5 260 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 NIFKQ9BYG3 293 aaKnown RBP23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SPON1Q9HCB6 807 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 PACSIN2Q9UNF0 486 aaPredicted RBP23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 TELO2Q9Y4R8 837 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ADGRA3Q8IWK6 1321 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 IGKV6D-21A0A0A0MT36 114 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 LRRIQ3A6PVS8 624 aaPredicted RBP23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 RFC5P40937 340 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 STRN3Q13033 797 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 NEDD9Q14511 834 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 FAM160B1Q5W0V3 765 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 NCAPG2Q86XI2 1143 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ACTRT1Q8TDG2 376 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 FAM81BQ96LP2 452 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 PDE11AQ9HCR9 933 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 RNF181Q9P0P0 153 aa23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 POLR2AP24928 1970 aaKnown RBP23.07■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 IRF6O14896 467 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 SORBS3O60504 671 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ZMYND10O75800 440 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 SLC25A27O95847 323 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 TGFB3P10600 412 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 HSP90B2PQ58FF3 399 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 DAAM2Q86T65 1068 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 FAM71AQ8IYT1 594 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ANKRD13AQ8IZ07 590 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 USP38Q8NB14 1042 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 FBXL13Q8NEE6 735 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 CNKSR2Q8WXI2 1034 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 NT5C1BQ96P26 610 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 DHX33Q9H6R0 707 aaKnown RBP23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ELP3Q9H9T3 547 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 NRBP2Q9NSY0 501 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 AMFRQ9UKV5 643 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 STXBP5LQ9Y2K9 1186 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 OTOFQ9HC10 1997 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ZNF233A6NK53 670 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 POLR3GO15318 223 aaPredicted RBP23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 LIG4P49917 911 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 DNAAF5Q86Y56 855 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 RHOT2Q8IXI1 618 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 IFT20Q8IY31 132 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 SLC35G2Q8TBE7 412 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 SLC7A3Q8WY07 619 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 PORCNQ9H237 461 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 MED4Q9NPJ6 270 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 PPME1Q9Y570 386 aa23.06■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 DOCK5Q9H7D0 1870 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 SOWAHBA6NEL2 793 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 TMCO5BA8MYB1 307 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 EXTL3O43909 919 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ZC3H11AO75152 810 aaKnown RBP eCLIP23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 UBA1P22314 1058 aaKnown RBP23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 NAMPTP43490 491 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 TCEAL1Q15170 157 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ENOSF1Q7L5Y1 443 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 NT5DC3Q86UY8 548 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 PPM1KQ8N3J5 372 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 AENQ8WTP8 325 aaKnown RBP23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 SHC3Q92529 594 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 OTUD5Q96G74 571 aa23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 DMGDHQ9UI17 866 aaKnown RBP23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 DIS3Q9Y2L1 958 aaKnown RBP23.05■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ATP4AP20648 1035 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ARL2P36404 184 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 USP8P40818 1118 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 HADHBP55084 474 aaKnown RBP23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 FSTL1Q12841 308 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 RPUSD2Q8IZ73 545 aaKnown RBP23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 DEPTORQ8TB45 409 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ISCUQ9H1K1 167 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 RAB20Q9NX57 234 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 SPDYE5A6NIY4 337 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 PGRMC1O00264 195 aaKnown RBP23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 CEP104O60308 925 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 FARP2O94887 1054 aaPredicted RBP23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ABCB4P21439 1286 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 SLFN12LQ6IEE8 588 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 TAS1R3Q7RTX0 852 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 FAM71BQ8TC56 605 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 HDAC7Q8WUI4 952 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 SLC20A1Q8WUM9 679 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 SEMA4DQ92854 862 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 HES6Q96HZ4 224 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 FAM213AQ9BRX8 229 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 ASCC2Q9H1I8 757 aaPredicted RBP23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 TMEM59LQ9UK28 342 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 AGTPBP1Q9UPW5 1226 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 STYXL1Q9Y6J8 313 aa23.04■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 H3BQF6 201 aa23.03■■□□□ 1.28
VPS9D1-AS1-202ENST00000562866 RTN2O75298 545 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms