RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 KLHL23Q8NBE8 558 aa21.94■■□□□ 1.1
TSPAN3-210ENST00000561277 COLGALT1Q8NBJ5 622 aa21.94■■□□□ 1.1
TSPAN3-210ENST00000561277 CNNM3Q8NE01 707 aa21.94■■□□□ 1.1
TSPAN3-210ENST00000561277 PLVAPQ9BX97 442 aa21.94■■□□□ 1.1
TSPAN3-210ENST00000561277 ZHX3Q9H4I2 956 aa21.94■■□□□ 1.1
TSPAN3-210ENST00000561277 AAASQ9NRG9 546 aa21.94■■□□□ 1.1
TSPAN3-210ENST00000561277 LARSQ9P2J5 1176 aaKnown RBP21.94■■□□□ 1.1
TSPAN3-210ENST00000561277 ARHGAP28Q9P2N2 729 aa21.94■■□□□ 1.1
TSPAN3-210ENST00000561277 PCDHB12Q9Y5F1 795 aa21.94■■□□□ 1.1
TSPAN3-210ENST00000561277 N4BP3O15049 544 aa21.93■■□□□ 1.1
TSPAN3-210ENST00000561277 GRM6O15303 877 aa21.93■■□□□ 1.1
TSPAN3-210ENST00000561277 OFD1O75665 1012 aa21.93■■□□□ 1.1
TSPAN3-210ENST00000561277 FAM13AO94988 1023 aa21.93■■□□□ 1.1
TSPAN3-210ENST00000561277 LAG3P18627 525 aa21.93■■□□□ 1.1
TSPAN3-210ENST00000561277 SMTNP53814 917 aa21.93■■□□□ 1.1
TSPAN3-210ENST00000561277 PTPROQ16827 1216 aa21.93■■□□□ 1.1
TSPAN3-210ENST00000561277 NOMO2Q5JPE7 1267 aa21.93■■□□□ 1.1
TSPAN3-210ENST00000561277 SHC4Q6S5L8 630 aa21.93■■□□□ 1.1
TSPAN3-210ENST00000561277 RNF39Q9H2S5 420 aa21.93■■□□□ 1.1
TSPAN3-210ENST00000561277 TBCAO75347 108 aaKnown RBP21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 ITGB1P05556 798 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 AFF1P51825 1210 aaKnown RBP21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 RNASELQ05823 741 aaKnown RBP21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 GIT2Q14161 759 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 EEF1DP3Q658K8 133 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 THNSL1Q8IYQ7 743 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 HACE1Q8IYU2 909 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 URGCPQ8TCY9 931 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 SPIRE2Q8WWL2 714 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 P2RX5Q93086 422 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 MRPL38Q96DV4 380 aaKnown RBP21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 ADPGKQ9BRR6 497 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 GBP3Q9H0R5 595 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 PCDHA7Q9UN72 937 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 PLAGL2Q9UPG8 496 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 RBM19Q9Y4C8 960 aaKnown RBP21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 XIRP2A4UGR9 3374 aa21.92■■□□□ 1.1
TSPAN3-210ENST00000561277 AKAP5P24588 427 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 MLH1P40692 756 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 KRT85P78386 507 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 SKIV2LQ15477 1246 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 AXDND1Q5T1B0 1012 aaPredicted RBP21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 NT5DC1Q5TFE4 455 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 ATF7IP2Q5U623 682 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 SV2BQ7L1I2 683 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 DYMQ7RTS9 669 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 TAS1R3Q7RTX0 852 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 MYCT1Q8N699 235 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 TMEM134Q9H6X4 195 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 PARVGQ9HBI0 331 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 TBC1D13Q9NVG8 400 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 LMCD1Q9NZU5 365 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 ZC3H11AO75152 810 aaKnown RBP eCLIP21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 KCNT2Q6UVM3 1135 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 TMEM161BQ8NDZ6 487 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 RSPH1Q8WYR4 309 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 ZNF558Q96NG5 402 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 NTPCRQ9BSD7 190 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 UBN1Q9NPG3 1134 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 RCOR1Q9UKL0 485 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 ATP6V1DQ9Y5K8 247 aa21.91■■□□□ 1.1
TSPAN3-210ENST00000561277 FGF18O76093 207 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 POMCP01189 267 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 STRN3Q13033 797 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 POF1BQ8WVV4 589 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 DDX12PQ92771 950 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 DHX58Q96C10 678 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 SPATA32Q96LK8 384 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 ZFP42Q96MM3 310 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 GAD1Q99259 594 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 TARS2Q9BW92 718 aaKnown RBP21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 MRPL4Q9BYD3 311 aaKnown RBP21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 PRDM6Q9NQX0 595 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 PARP2Q9UGN5 583 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 KCNG1Q9UIX4 513 aa21.9■■□□□ 1.1
TSPAN3-210ENST00000561277 PLXNA4Q9HCM2 1894 aa21.89■■□□□ 1.1
TSPAN3-210ENST00000561277 MYMKA6NI61 221 aa21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 K7ENM7 598 aa21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 MAPTP10636 758 aaKnown RBP21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 DNAJB1P25685 340 aa21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 ZNF131P52739 623 aa21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 NCKAP1LP55160 1127 aa21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 CSPP1Q1MSJ5 1256 aa21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 SPPL3Q8TCT6 385 aa21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 LEO1Q8WVC0 666 aaPredicted RBP21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 KLK14Q9P0G3 267 aa21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 TNFSF13BQ9Y275 285 aa21.89■■□□□ 1.09
TSPAN3-210ENST00000561277 ARL5CA6NH57 179 aa21.88■■□□□ 1.09
TSPAN3-210ENST00000561277 NT5C1B-RDH14C9J2C7 533 aa21.88■■□□□ 1.09
TSPAN3-210ENST00000561277 BCAR1P56945 870 aa21.88■■□□□ 1.09
TSPAN3-210ENST00000561277 ZNF568Q3ZCX4 644 aa21.88■■□□□ 1.09
TSPAN3-210ENST00000561277 HAUS6Q7Z4H7 955 aa21.88■■□□□ 1.09
TSPAN3-210ENST00000561277 ACO2Q99798 780 aaKnown RBP21.88■■□□□ 1.09
TSPAN3-210ENST00000561277 LMAN2LQ9H0V9 348 aa21.88■■□□□ 1.09
TSPAN3-210ENST00000561277 NRDE2Q9H7Z3 1164 aa21.88■■□□□ 1.09
TSPAN3-210ENST00000561277 DNAJB4Q9UDY4 337 aa21.88■■□□□ 1.09
TSPAN3-210ENST00000561277 GIT1Q9Y2X7 761 aa21.88■■□□□ 1.09
TSPAN3-210ENST00000561277 TRAK2O60296 914 aa21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 ALDH7A1P49419 539 aaKnown RBP21.87■■□□□ 1.09
TSPAN3-210ENST00000561277 SCNN1GP51170 649 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms