RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 FAM151AQ8WW52 585 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 SOCS4Q8WXH5 440 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 SHDQ96IW2 340 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 PLEKHF1Q96S99 279 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 MYD88Q99836 296 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 TXNRD2Q9NNW7 524 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 FAM86C1Q9NVL1 165 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 BABAM1Q9NWV8 329 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 CWC25Q9NXE8 425 aaPredicted RBP4.79□□□□□ -1.64
HERC1-211ENST00000560983 DBF4Q9UBU7 674 aaPredicted RBP4.79□□□□□ -1.64
HERC1-211ENST00000560983 CGGBP1Q9UFW8 167 aaPredicted RBP4.79□□□□□ -1.64
HERC1-211ENST00000560983 PMF1-BGLAPU3KQ54 211 aa4.79□□□□□ -1.64
HERC1-211ENST00000560983 ZFHX2Q9C0A1 2572 aaPredicted RBP4.79□□□□□ -1.64
HERC1-211ENST00000560983 ZDBF2Q9HCK1 2354 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 KMT2BQ9UMN6 2715 aaPredicted RBP4.78□□□□□ -1.64
HERC1-211ENST00000560983 MED19A0JLT2 244 aaPredicted RBP4.78□□□□□ -1.64
HERC1-211ENST00000560983 TRIM75PA6NK02 468 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 DCXO43602 365 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 PRICKLE3O43900 615 aaPredicted RBP4.78□□□□□ -1.64
HERC1-211ENST00000560983 MSCO60682 206 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 TIMP1P01033 207 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 CSF1RP07333 972 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 MYOGP15173 224 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 PMLP29590 882 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 IGHMBP2P38935 993 aaKnown RBP4.78□□□□□ -1.64
HERC1-211ENST00000560983 RGS2P41220 211 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 SLC7A5Q01650 507 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 RTP5Q14D33 572 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 RAB30Q15771 203 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 HEATR6Q6AI08 1181 aaKnown RBP4.78□□□□□ -1.64
HERC1-211ENST00000560983 DBX2Q6ZNG2 339 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 ZNF365Q70YC5 407 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 ZNF804AQ7Z570 1209 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 ARRDC4Q8NCT1 418 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 FERMT2Q96AC1 680 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 GPRASP2Q96D09 838 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 GBP3Q9H0R5 595 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 PORCNQ9H237 461 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 SLC28A3Q9HAS3 691 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.78□□□□□ -1.64
HERC1-211ENST00000560983 RBPJLQ9UBG7 517 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 MSRAQ9UJ68 235 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 NUDCQ9Y266 331 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 EFR3BQ9Y2G0 817 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 BACE2Q9Y5Z0 518 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 LTBP2Q14767 1821 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 ASPMQ8IZT6 3477 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 ATRNL1Q5VV63 1379 aa4.78□□□□□ -1.64
HERC1-211ENST00000560983 BAHCC1Q9P281 2608 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 EPG5Q9HCE0 2579 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 UTYO14607 1347 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.77□□□□□ -1.65
HERC1-211ENST00000560983 A0A1W2PQJ5 194 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 EPOPA6NHQ4 379 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 STXBP3O00186 592 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 VAMP4O75379 141 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 IGKV5-2P06315 115 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 ADRB1P08588 477 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 CNGA1P29973 690 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 CYP2C19P33261 490 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 MC3RP41968 323 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 ID4P47928 161 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 RABGGTBP53611 331 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 RBM10P98175 930 aaKnown RBP4.77□□□□□ -1.65
HERC1-211ENST00000560983 TCP10Q12799 353 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 PPP2R5DQ14738 602 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 SLC9A5Q14940 896 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 LRRC41Q15345 812 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 NFE2L2Q16236 605 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 GNPTABQ3T906 1256 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 TMCO4Q5TGY1 634 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 ERICH6BQ5W0A0 696 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 ANO1Q5XXA6 986 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 MFSD5Q6N075 450 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 ANKRD33Q7Z3H0 272 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 GPR142Q7Z601 462 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 SLC44A5Q8NCS7 719 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 RGS22Q8NE09 1264 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 GPRC5AQ8NFJ5 357 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 ADCY4Q8NFM4 1077 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.77□□□□□ -1.65
HERC1-211ENST00000560983 COPS5Q92905 334 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 TEKT1Q969V4 418 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 EDC3Q96F86 508 aaKnown RBP4.77□□□□□ -1.65
HERC1-211ENST00000560983 FAM84BQ96KN1 310 aaPredicted RBP4.77□□□□□ -1.65
HERC1-211ENST00000560983 MPHOSPH8Q99549 860 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 HYPKQ9NX55 129 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 PCDHB10Q9UN67 800 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 CACNA1BQ00975 2339 aa4.77□□□□□ -1.65
HERC1-211ENST00000560983 TRIOO75962 3097 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 GAKO14976 1311 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 TRBV23OR9-2A0A075B6M9 112 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 A0A1B0GTL3 188 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 C2orf71A6NGG8 1288 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 PROB1E7EW31 1015 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 CHL1O00533 1208 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 NOBOXO60393 691 aa4.76□□□□□ -1.65
HERC1-211ENST00000560983 CTNND1O60716 968 aaKnown RBP4.76□□□□□ -1.65
HERC1-211ENST00000560983 PQBP1O60828 265 aaKnown RBP4.76□□□□□ -1.65
HERC1-211ENST00000560983 HOXC6P09630 235 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms