RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CD320Q9NPF0 282 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 LRWD1Q9UFC0 647 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 FAN1Q9Y2M0 1017 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 PCDHGC5Q9Y5F6 944 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 SPDYE4A6NLX3 237 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 HIDE1A8MVS5 230 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 DTNBO60941 627 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 URODP06132 367 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 SPATA31C1P0DKV0 1188 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 GLRA2P23416 452 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 U2AF2P26368 475 aaKnown RBP eCLIP15.59■□□□□ 0.094e-8■■■■■ 38.8
TPM1-223ENST00000560445 CCT6AP40227 531 aaKnown RBP15.59■□□□□ 0.09
TPM1-223ENST00000560445 PRPHP41219 470 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 MTHFRP42898 656 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 NAMPTP43490 491 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 EFNA5P52803 228 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 MAPK6Q16659 721 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 RILPL1Q5EBL4 403 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 KRT79Q5XKE5 535 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 AGMOQ6ZNB7 445 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 DEPTORQ8TB45 409 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 ASAP3Q8TDY4 903 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 SUSD6Q92537 303 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 RPS6KC1Q96S38 1066 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 ADPGKQ9BRR6 497 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 MRPL17Q9NRX2 175 aaKnown RBP15.59■□□□□ 0.09
TPM1-223ENST00000560445 KCNG1Q9UIX4 513 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 IPPQ9Y573 584 aa15.59■□□□□ 0.09
TPM1-223ENST00000560445 H3BQV1 296 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 N4BP3O15049 544 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 ZBTB39O15060 712 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 CYP11B2P19099 503 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 SLC11A1P49279 550 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 CREMQ03060 361 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 FAM187BQ17R55 369 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 LONRF3Q496Y0 759 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 UBXN11Q5T124 520 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 CDCA2Q69YH5 1023 aaPredicted RBP15.58■□□□□ 0.08
TPM1-223ENST00000560445 LLGL2Q6P1M3 1020 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 PADI6Q6TGC4 694 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 RNF135Q8IUD6 432 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 COLEC11Q9BWP8 271 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 KCNH6Q9H252 994 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 HCFC2Q9Y5Z7 792 aa15.58■□□□□ 0.08
TPM1-223ENST00000560445 A0A1B0GUA9 196 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 ARL5CA6NH57 179 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 LOC730098B7Z3J9 87 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 NT5C1B-RDH14C9J2C7 533 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 CLASP2O75122 1294 aaKnown RBP15.57■□□□□ 0.08
TPM1-223ENST00000560445 MED24O75448 989 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 ARF4P18085 180 aaPredicted RBP15.57■□□□□ 0.08
TPM1-223ENST00000560445 GRIK3Q13003 919 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 KCNC3Q14003 757 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 POTEGQ6S5H5 508 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 DTHD1Q6ZMT9 781 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 GPR65Q8IYL9 337 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 FAM122AQ96E09 287 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 MFSD14AQ96MC6 490 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 TIPINQ9BVW5 301 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 ADAM7Q9H2U9 754 aa15.57■□□□□ 0.08
TPM1-223ENST00000560445 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.57■□□□□ 0.08
TPM1-223ENST00000560445 WNT7AO00755 349 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 C1RP00736 705 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 POMCP01189 267 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 ADH1AP07327 375 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 MLH1P40692 756 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 OR1G1P47890 313 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 PRPF4BQ13523 1007 aaKnown RBP15.56■□□□□ 0.08
TPM1-223ENST00000560445 DCAF4L1Q3SXM0 396 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 ATAT1Q5SQI0 421 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 MCTP1Q6DN14 999 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 KIAA1841Q6NSI8 718 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 CABP7Q86V35 215 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 SMG8Q8ND04 991 aaKnown RBP15.56■□□□□ 0.08
TPM1-223ENST00000560445 VN1R2Q8NFZ6 395 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 SNX29Q8TEQ0 813 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 CPB2Q96IY4 423 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 GAD1Q99259 594 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 KIF2CQ99661 725 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 SFXN1Q9H9B4 322 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.56■□□□□ 0.08
TPM1-223ENST00000560445 DNAJB4Q9UDY4 337 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 DNM3Q9UQ16 869 aa15.56■□□□□ 0.08
TPM1-223ENST00000560445 TDRD15B5MCY1 1934 aaKnown RBP15.55■□□□□ 0.08
TPM1-223ENST00000560445 NRP1O14786 923 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 BMP15O95972 392 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 SOD2P04179 222 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 KLRC2P26717 231 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 PTGDRQ13258 359 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 PTPN14Q15678 1187 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 AMHR2Q16671 573 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 CYP26C1Q6V0L0 522 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 MAEAQ7L5Y9 396 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 ZBTB33Q86T24 672 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 ZNF280BQ86YH2 543 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 IGSF22Q8N9C0 903 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 EDAQ92838 391 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 KHSRPQ92945 711 aaKnown RBP eCLIP15.55■□□□□ 0.08
TPM1-223ENST00000560445 RPGRIP1Q96KN7 1286 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 DRC1Q96MC2 740 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms