RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 HELQQ8TDG4 1101 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 KIFAP3Q92845 792 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 PGBD4Q96DM1 585 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 FAM122AQ96E09 287 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 PRIMPOLQ96LW4 560 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 PNMA5Q96PV4 448 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 NT5C3AQ9H0P0 336 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 FZD8Q9H461 694 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 ENTPD7Q9NQZ7 604 aa16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 USP15Q9Y4E8 981 aaPredicted RBP16.79■□□□□ 0.28
SNRPA1-210ENST00000560383 A0A1B0GUA9 196 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 LRRIQ4A6NIV6 560 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 MEIS3P2A8K0S8 358 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 PER2O15055 1255 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 STX6O43752 255 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 OFD1O75665 1012 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 ARF4P18085 180 aaPredicted RBP16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 NCLP19338 710 aaKnown RBP16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 NAMPTP43490 491 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 ALDH7A1P49419 539 aaKnown RBP16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 NCBP1Q09161 790 aaKnown RBP16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 PPP2R5AQ15172 486 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 PTPAQ15257 358 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 TMEM119Q4V9L6 283 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 PLPP4Q5VZY2 271 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 AGMOQ6ZNB7 445 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 CNNM3Q8NE01 707 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 VN1R2Q8NFZ6 395 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 SUSD6Q92537 303 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 LPPQ93052 612 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 CSRNP2Q9H175 543 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 C2orf40Q9H1Z8 148 aa16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 MORC2Q9Y6X9 1032 aaPredicted RBP16.78■□□□□ 0.28
SNRPA1-210ENST00000560383 CNTNAP2Q9UHC6 1331 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 LOC730098B7Z3J9 87 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 LONP1P36776 959 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 PBX3P40426 434 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 BCAR1P56945 870 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 SMC1AQ14683 1233 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 CBX2Q14781 532 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 RINT1Q6NUQ1 792 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 GLB1LQ6UWU2 654 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 C1orf186Q6ZWK4 172 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 RNF135Q8IUD6 432 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 HSCBQ8IWL3 235 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 ZBTB8OSQ8IWT0 167 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 DAW1Q8N136 415 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 SMG8Q8ND04 991 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 PHF7Q9BWX1 381 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 CCDC113Q9H0I3 377 aa16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 ZSCAN16Q9H4T2 348 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 PRMT7Q9NVM4 692 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-210ENST00000560383 HIDE1A8MVS5 230 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 INPPL1O15357 1258 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 B4GALT5O43286 388 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 PDIA4P13667 645 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 HOXB8P17481 243 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 GUCY2CP25092 1073 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 MAPK7Q13164 816 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 BMS1Q14692 1282 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 NOMO2Q5JPE7 1267 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 TMC7Q7Z402 723 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 CABP7Q86V35 215 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 SYT2Q8N9I0 419 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 TMEM169Q96HH4 297 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 CPB2Q96IY4 423 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 IFT74Q96LB3 600 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 RUSC1Q9BVN2 902 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 TIPINQ9BVW5 301 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 EIF2AQ9BY44 585 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 UBN1Q9NPG3 1134 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 TBC1D13Q9NVG8 400 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 STK39Q9UEW8 545 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 IPPQ9Y573 584 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 CLIC4Q9Y696 253 aa16.76■□□□□ 0.27
SNRPA1-210ENST00000560383 UBA7P41226 1012 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 EFNA5P52803 228 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 SLC12A3P55017 1021 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 RBM10P98175 930 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 GRIN1Q05586 938 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 MAPK6Q16659 721 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 ANKRD54Q6NXT1 300 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 FAM173BQ6P4H8 233 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 SLC27A1Q6PCB7 646 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 MRPL43Q8N983 215 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 RSAD1Q9HA92 442 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 C17orf75Q9HAS0 396 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 KCND2Q9NZV8 630 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 MUTYHQ9UIF7 546 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 IRAK3Q9Y616 596 aa16.75■□□□□ 0.27
SNRPA1-210ENST00000560383 C2orf71A6NGG8 1288 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 ACKR2O00590 384 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 HIP1RO75146 1068 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 ZC3H11AO75152 810 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 GIT2Q14161 759 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 LONRF3Q496Y0 759 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 DEPTORQ8TB45 409 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 CASP10Q92851 521 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 CDK5RAP3Q96JB5 506 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms