RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 RBM19Q9Y4C8 960 aaKnown RBP14.59□□□□□ -0.07
SMAD3-213ENST00000560175 B4GALT3O60512 393 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 HIP1RO75146 1068 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 DDHD2O94830 711 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 EFEMP2O95967 443 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 PLA2G4BP0C869 781 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 ITGA4P13612 1032 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 UBA7P41226 1012 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 NASPP49321 788 aaPredicted RBP14.58□□□□□ -0.08
SMAD3-213ENST00000560175 ALDH7A1P49419 539 aaKnown RBP14.58□□□□□ -0.08
SMAD3-213ENST00000560175 KRT17Q04695 432 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 DSC1Q08554 894 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 KCNC3Q14003 757 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 LONRF3Q496Y0 759 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 NT5DC1Q5TFE4 455 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 TAS1R3Q7RTX0 852 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 ZNF280BQ86YH2 543 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 HSCBQ8IWL3 235 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 THNSL1Q8IYQ7 743 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.58□□□□□ -0.08
SMAD3-213ENST00000560175 DEPTORQ8TB45 409 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 SPIRE2Q8WWL2 714 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 DRC1Q96MC2 740 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 USP28Q96RU2 1077 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 TMEM175Q9BSA9 504 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 PDZD7Q9H5P4 517 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 PTPRHQ9HD43 1115 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 TLR9Q9NR96 1032 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 MIOSQ9NXC5 875 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 PUF60Q9UHX1 559 aaKnown RBP14.58□□□□□ -0.08
SMAD3-213ENST00000560175 HES2Q9Y543 173 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 TRIP11Q15643 1979 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 BDP1A6H8Y1 2624 aa14.58□□□□□ -0.08
SMAD3-213ENST00000560175 ARL5CA6NH57 179 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 K7ERI5 159 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 N4BP3O15049 544 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 PRKCBP05771 671 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 DDIT3P35638 169 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 PBX3P40426 434 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 KCNQ1P51787 676 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 PEX3P56589 373 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 PRPF4BQ13523 1007 aaKnown RBP14.57□□□□□ -0.08
SMAD3-213ENST00000560175 USP49Q70CQ1 688 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 ADGRD2Q7Z7M1 963 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 CDR2LQ86X02 465 aaPredicted RBP14.57□□□□□ -0.08
SMAD3-213ENST00000560175 EFHBQ8N7U6 833 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 URGCPQ8TCY9 931 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 CALML4Q96GE6 196 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 IGSF21Q96ID5 467 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 NXF3Q9H4D5 531 aaKnown RBP14.57□□□□□ -0.08
SMAD3-213ENST00000560175 NGRNQ9NPE2 291 aaKnown RBP14.57□□□□□ -0.08
SMAD3-213ENST00000560175 DNAJB4Q9UDY4 337 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 IRAK3Q9Y616 596 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 PHLPP2Q6ZVD8 1323 aa14.57□□□□□ -0.08
SMAD3-213ENST00000560175 ALDH2P05091 517 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 PLS3P13797 630 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 MARCKSP29966 332 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-213ENST00000560175 GTF2F1P35269 517 aaKnown RBP eCLIP14.56□□□□□ -0.081e-8■■■■■ 46.3
SMAD3-213ENST00000560175 SLC11A1P49279 550 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 ZNF131P52739 623 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 TMEM184AQ6ZMB5 413 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 DDX53Q86TM3 631 aaKnown RBP14.56□□□□□ -0.08
SMAD3-213ENST00000560175 TMEM173Q86WV6 379 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-213ENST00000560175 COLGALT2Q8IYK4 626 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 HACE1Q8IYU2 909 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 LINC00301Q8NCQ3 95 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 RAD54LQ92698 747 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 PPP2R3CQ969Q6 453 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 EPSTI1Q96J88 318 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 CDK5RAP3Q96JB5 506 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 GAD1Q99259 594 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 PLIN2Q99541 437 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 CDCA3Q99618 268 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-213ENST00000560175 ACO2Q99798 780 aaKnown RBP14.56□□□□□ -0.08
SMAD3-213ENST00000560175 KIFC3Q9BVG8 833 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 ODF2LQ9ULJ1 636 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 TNFSF13BQ9Y275 285 aa14.56□□□□□ -0.08
SMAD3-213ENST00000560175 FSD2A1L4K1 749 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 GRXCR2A6NFK2 248 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 SFI1A8K8P3 1242 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 NT5C1B-RDH14C9J2C7 533 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 ABLIM1O14639 778 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 ZC3H11AO75152 810 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMAD3-213ENST00000560175 NPTXRO95502 500 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 BRD1O95696 1058 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 PLCG1P19174 1290 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 KCNA5P22460 613 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 PROZP22891 400 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 DLX2Q07687 328 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-213ENST00000560175 DMP1Q13316 513 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-213ENST00000560175 KARSQ15046 597 aaKnown RBP14.55□□□□□ -0.08
SMAD3-213ENST00000560175 ZRSR1Q15695 479 aaKnown RBP14.55□□□□□ -0.08
SMAD3-213ENST00000560175 PUS10Q3MIT2 529 aaKnown RBP14.55□□□□□ -0.08
SMAD3-213ENST00000560175 EEF1DP3Q658K8 133 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 RNF168Q8IYW5 571 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-213ENST00000560175 MRPL43Q8N983 215 aaKnown RBP14.55□□□□□ -0.08
SMAD3-213ENST00000560175 TMEM161BQ8NDZ6 487 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 BCL7CQ8WUZ0 217 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-213ENST00000560175 MSLNLQ96KJ4 702 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms