RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 SRLQ86TD4 932 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 FANCBQ8NB91 859 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 CDYLQ9Y232 598 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 PSMD3O43242 534 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 PDE5AO76074 875 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 MRPS35P82673 323 aaKnown RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 CCDC81Q6ZN84 652 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 LONP2Q86WA8 852 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 RUBCNQ92622 972 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 TSPAN17Q96FV3 270 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 NARS2Q96I59 477 aaKnown RBP14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 CEP170P1Q96L14 293 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 PCDHA7Q9UN72 937 aa14.63□□□□□ -0.07
CSPG4P12-202ENST00000559989 ZNF544Q6NX49 715 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 NEK10Q6ZWH5 1172 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 ZBED8Q8IZ13 594 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 CMTR1Q8N1G2 835 aaKnown RBP14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 GPKOWQ92917 476 aaPredicted RBP eCLIP14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 CFAP65Q6ZU64 1925 aaKnown RBP14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 GRID2IPA4D2P6 1211 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 GPS1Q13098 491 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 Q3C1V9 767 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 ACCSLQ4AC99 568 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 PPP1R36Q96LQ0 422 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 HDHD2Q9H0R4 259 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 CLASP2O75122 1294 aaKnown RBP14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 TYK2P29597 1187 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 IL12RB1P42701 662 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 GPR141Q7Z602 305 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 CCDC60Q8IWA6 550 aaPredicted RBP14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 MAN1B1Q9UKM7 699 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 PYCARDQ9ULZ3 195 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 GRIN2BQ13224 1484 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 PFKFB2O60825 505 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 PSAPP07602 524 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 KCTD2Q14681 263 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 OR6B3Q8NGW1 331 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 MOSPD2Q8NHP6 518 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 AFG1LQ8WV93 481 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 ITSN2Q9NZM3 1697 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 LRRC63Q05C16 580 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 CUL4AQ13619 759 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 URGCPQ8TCY9 931 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 BRAFP15056 766 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 PDAP1Q13442 181 aaKnown RBP14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 CTTNQ14247 550 aaKnown RBP14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 AGGF1Q8N302 714 aaeCLIP14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 MB21D1Q8N884 522 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 GLMNQ92990 594 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 DBNDD2Q9BQY9 259 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 TINF2Q9BSI4 451 aa14.62□□□□□ -0.07
CSPG4P12-202ENST00000559989 FOXP2O15409 715 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 PALMO75781 387 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 LAMB3Q13751 1172 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 CHRNA3P32297 505 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 RNASE11Q8TAA1 199 aaKnown RBP14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 POLIQ9UNA4 740 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 ABCC1P33527 1531 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 ADCY9O60503 1353 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 ENO4A6NNW6 628 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 TAF5LO75529 589 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 KRT74Q7RTS7 529 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 KLHL2O95198 593 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 ATP12AP54707 1039 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 MTHFD1LQ6UB35 978 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 CDKL3Q8IVW4 592 aaPredicted RBP14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 IP6K2Q9UHH9 426 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 ALDH6A1Q02252 535 aaKnown RBP14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 PHKG1Q16816 387 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 SPTLC3Q9NUV7 552 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 SMIM31A0A1B0GVY4 71 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 NUP107P57740 925 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 ICA1Q05084 483 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 RAD51Q06609 339 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 C19orf44Q9H6X5 657 aa14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 YTHDC2Q9H6S0 1430 aaKnown RBP14.61□□□□□ -0.07
CSPG4P12-202ENST00000559989 RNMTO43148 476 aaKnown RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 PPIP5K2O43314 1243 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 ZAP70P43403 619 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 KDSRQ06136 332 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 HEATR4Q86WZ0 1026 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 GALNT4Q8N4A0 578 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 SERHL2Q9H4I8 314 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 SERHLQ9NQF3 203 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 COPB2P35606 906 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 PHKA1P46020 1223 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 GPC5P78333 572 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 PURAQ00577 322 aaKnown RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 MSTO1Q9BUK6 570 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 ENO3P13929 434 aaPredicted RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 SOAT1P35610 550 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 TNFAIP2Q03169 654 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 ASAP3Q8TDY4 903 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 PRMT1Q99873 361 aaKnown RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 TNPO2O14787 897 aaKnown RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 KCNQ4P56696 695 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 MDH1BQ5I0G3 518 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 TTC33Q6PID6 262 aaPredicted RBP14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 AMNQ9BXJ7 453 aa14.6□□□□□ -0.07
CSPG4P12-202ENST00000559989 WNT8AQ9H1J5 351 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms