RNA–Protein interactions for RNA: ENST00000559863.1

IRF9-206, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-206ENST00000559863 HABP4Q5JVS0 413 aaKnown RBP13.19□□□□□ -0.3
IRF9-206ENST00000559863 PAOXQ6QHF9 649 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 ESPNLQ6ZVH7 1005 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 CEP68Q76N32 757 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 CXorf67Q86X51 503 aaPredicted RBP13.19□□□□□ -0.3
IRF9-206ENST00000559863 TMTC2Q8N394 836 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 PRR18Q8N4B5 295 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 PPP1R35Q8TAP8 253 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 JADE2Q9NQC1 790 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 AP5S1Q9NUS5 200 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 SRPK3Q9UPE1 567 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 CAPN6Q9Y6Q1 641 aa13.19□□□□□ -0.3
IRF9-206ENST00000559863 USP42Q9H9J4 1324 aaKnown RBP13.18□□□□□ -0.3
IRF9-206ENST00000559863 FAM95CA0A1B0GW59 222 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 CAPN8A6NHC0 703 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 HSD3B1P14060 373 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 GRK6P43250 576 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 MAP2K1Q02750 393 aaPredicted RBP13.18□□□□□ -0.3
IRF9-206ENST00000559863 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 DGKKQ5KSL6 1271 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 ESRP1Q6NXG1 681 aaKnown RBP13.18□□□□□ -0.3
IRF9-206ENST00000559863 PPHLN1Q8NEY8 458 aaKnown RBP13.18□□□□□ -0.3
IRF9-206ENST00000559863 MAML3Q96JK9 1138 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 TBATAQ96M53 351 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 CRB3Q9BUF7 120 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 B3GNT5Q9BYG0 378 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 C1GALT1Q9NS00 363 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 FBXL7Q9UJT9 491 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 ATP23Q9Y6H3 246 aa13.18□□□□□ -0.3
IRF9-206ENST00000559863 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
IRF9-206ENST00000559863 FAM155AB1AL88 458 aaPredicted RBP13.17□□□□□ -0.3
IRF9-206ENST00000559863 POLRMTO00411 1230 aaKnown RBP13.17□□□□□ -0.3
IRF9-206ENST00000559863 MAN2B1O00754 1011 aa13.17□□□□□ -0.3
IRF9-206ENST00000559863 GJA4P35212 333 aa13.17□□□□□ -0.3
IRF9-206ENST00000559863 ANO6Q4KMQ2 910 aa13.17□□□□□ -0.3
IRF9-206ENST00000559863 SGO2Q562F6 1265 aa13.17□□□□□ -0.3
IRF9-206ENST00000559863 MBNL2Q5VZF2 373 aaKnown RBP13.17□□□□□ -0.3
IRF9-206ENST00000559863 TSPYL5Q86VY4 417 aaPredicted RBP13.17□□□□□ -0.3
IRF9-206ENST00000559863 OR2C3Q8N628 320 aa13.17□□□□□ -0.3
IRF9-206ENST00000559863 COA7Q96BR5 231 aa13.17□□□□□ -0.3
IRF9-206ENST00000559863 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
IRF9-206ENST00000559863 ISCA1Q9BUE6 129 aa13.17□□□□□ -0.3
IRF9-206ENST00000559863 WDR12Q9GZL7 423 aaKnown RBP13.17□□□□□ -0.3
IRF9-206ENST00000559863 POLHQ9Y253 713 aa13.17□□□□□ -0.3
IRF9-206ENST00000559863 RNF225M0QZC1 329 aaPredicted RBP13.16□□□□□ -0.3
IRF9-206ENST00000559863 KRIT1O00522 736 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 FAM87AP0C7U9 286 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 PRRT3Q5FWE3 981 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 Q6ZS46 218 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 KCNK18Q7Z418 384 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 LDHDQ86WU2 507 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 Q8N1Y9 231 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 AUTS2Q8WXX7 1259 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 FAM46AQ96IP4 442 aaKnown RBP13.16□□□□□ -0.3
IRF9-206ENST00000559863 MPP4Q96JB8 637 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 DUSP15Q9H1R2 295 aaPredicted RBP13.16□□□□□ -0.3
IRF9-206ENST00000559863 BHMT2Q9H2M3 363 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 DSEQ9UL01 958 aa13.16□□□□□ -0.3
IRF9-206ENST00000559863 KCNK3O14649 394 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 TLR5O60602 858 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 LEFTY1O75610 366 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 MAP4P27816 1152 aaKnown RBP13.15□□□□□ -0.3
IRF9-206ENST00000559863 MOGSQ13724 837 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 TMEM132BQ14DG7 1078 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 NPNTQ6UXI9 565 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 TTLL6Q8N841 843 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 LRTOMTQ8WZ04 291 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 RTF1Q92541 710 aaKnown RBP13.15□□□□□ -0.3
IRF9-206ENST00000559863 C16orf92Q96LL3 132 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 RIPOR3Q96MK2 946 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 SMOC1Q9H4F8 434 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 TUBD1Q9UJT1 453 aa13.15□□□□□ -0.3
IRF9-206ENST00000559863 MAFKO60675 156 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 COL6A2P12110 1019 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 HTR1BP28222 390 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 MANFP55145 182 aaKnown RBP13.14□□□□□ -0.31
IRF9-206ENST00000559863 CT83Q5H943 113 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 JAKMIP3Q5VZ66 844 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 NLRP10Q86W26 655 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 PHYKPLQ8IUZ5 450 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 SIRT2Q8IXJ6 389 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 C7orf31Q8N865 590 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 EAF2Q96CJ1 260 aaPredicted RBP13.14□□□□□ -0.31
IRF9-206ENST00000559863 ANO3Q9BYT9 981 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 FOXP3Q9BZS1 431 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 RPS6KL1Q9Y6S9 549 aa13.14□□□□□ -0.31
IRF9-206ENST00000559863 MYH14Q7Z406 1995 aaKnown RBP13.13□□□□□ -0.31
IRF9-206ENST00000559863 DLEC1Q9Y238 1755 aa13.13□□□□□ -0.31
IRF9-206ENST00000559863 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
IRF9-206ENST00000559863 LCHNA4D1U4 455 aa13.13□□□□□ -0.31
IRF9-206ENST00000559863 FOXN3O00409 490 aaPredicted RBP13.13□□□□□ -0.31
IRF9-206ENST00000559863 RPL17P18621 184 aaKnown RBP13.13□□□□□ -0.31
IRF9-206ENST00000559863 TM4SF1P30408 202 aa13.13□□□□□ -0.31
IRF9-206ENST00000559863 AGFG1P52594 562 aaKnown RBP13.13□□□□□ -0.31
IRF9-206ENST00000559863 ALDH6A1Q02252 535 aaKnown RBP13.13□□□□□ -0.31
IRF9-206ENST00000559863 HLA-DQA1Q5Y7H0 255 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms