RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 SMG8Q8ND04 991 aaKnown RBP13.61□□□□□ -0.23
SPG11-219ENST00000559822 ASAP3Q8TDY4 903 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 PIGOQ8TEQ8 1089 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 PRIMPOLQ96LW4 560 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 POLR3CQ9BUI4 534 aaPredicted RBP13.61□□□□□ -0.23
SPG11-219ENST00000559822 POLR3FQ9H1D9 316 aaPredicted RBP13.61□□□□□ -0.23
SPG11-219ENST00000559822 DAXXQ9UER7 740 aaPredicted RBP13.61□□□□□ -0.23
SPG11-219ENST00000559822 DBR1Q9UK59 544 aaKnown RBP13.61□□□□□ -0.23
SPG11-219ENST00000559822 NOL7Q9UMY1 257 aaKnown RBP13.61□□□□□ -0.23
SPG11-219ENST00000559822 GIT1Q9Y2X7 761 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 C5orf42Q9H799 3197 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 TMEM221A6NGB7 291 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 ARL5CA6NH57 179 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 LRRIQ4A6NIV6 560 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 M0R296 226 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 WNT7AO00755 349 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 NRP1O14786 923 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 SEC24BO95487 1268 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 URODP06132 367 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 ARF4P18085 180 aaPredicted RBP13.6□□□□□ -0.23
SPG11-219ENST00000559822 MUTP22033 750 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 MLH1P40692 756 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 TRAPPC10P48553 1259 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 SIGLEC14Q08ET2 396 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 PTPN21Q16825 1174 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 ATAT1Q5SQI0 421 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 RARS2Q5T160 578 aaKnown RBP13.6□□□□□ -0.23
SPG11-219ENST00000559822 HAUS3Q68CZ6 603 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 KIAA1841Q6NSI8 718 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 SLC27A1Q6PCB7 646 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 CABP7Q86V35 215 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 BCL7CQ8WUZ0 217 aaPredicted RBP13.6□□□□□ -0.23
SPG11-219ENST00000559822 AUTS2Q8WXX7 1259 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 PBXIP1Q96AQ6 731 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 CPB2Q96IY4 423 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 EIF2AQ9BY44 585 aaKnown RBP13.6□□□□□ -0.23
SPG11-219ENST00000559822 C2orf40Q9H1Z8 148 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 TMEM60Q9H2L4 133 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 SFXN1Q9H9B4 322 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 TSHZ2Q9NRE2 1034 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 MRPL17Q9NRX2 175 aaKnown RBP13.6□□□□□ -0.23
SPG11-219ENST00000559822 PRMT7Q9NVM4 692 aaPredicted RBP13.6□□□□□ -0.23
SPG11-219ENST00000559822 DPP7Q9UHL4 492 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 MUC6Q6W4X9 2439 aa13.6□□□□□ -0.23
SPG11-219ENST00000559822 B4GALT3O60512 393 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 SOD2P04179 222 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 SPATA31C1P0DKV0 1188 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 EPCAMP16422 314 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 KLRC2P26717 231 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 RPA1P27694 616 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
SPG11-219ENST00000559822 OR1G1P47890 313 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 AMHR2Q16671 573 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 TTC38Q5R3I4 469 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 CATSPER3Q86XQ3 398 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 COLGALT2Q8IYK4 626 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 FBXO18Q8NFZ0 1043 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 SLC22A17Q8WUG5 538 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 GAD1Q99259 594 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 PRRX2Q99811 253 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 HERC2P3Q9BVR0 1158 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 POMKQ9H5K3 350 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 USTQ9Y2C2 406 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 PRG3Q9Y2Y8 225 aaPredicted RBP13.59□□□□□ -0.23
SPG11-219ENST00000559822 STK24Q9Y6E0 443 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 TECTAO75443 2155 aa13.59□□□□□ -0.23
SPG11-219ENST00000559822 A0A1B0GUA9 196 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 ARHGEF35A5YM69 484 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 MED24O75448 989 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 SSBP05455 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
SPG11-219ENST00000559822 ADH1AP07327 375 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 SP100P23497 879 aaPredicted RBP13.58□□□□□ -0.24
SPG11-219ENST00000559822 SCNN1GP51170 649 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 AFF1P51825 1210 aaKnown RBP13.58□□□□□ -0.24
SPG11-219ENST00000559822 DSC1Q08554 894 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 GRIK3Q13003 919 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 PPP2R5AQ15172 486 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 ZNF174Q15697 407 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 FAM187BQ17R55 369 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 TMEM132AQ24JP5 1023 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 CDCA2Q69YH5 1023 aaPredicted RBP13.58□□□□□ -0.24
SPG11-219ENST00000559822 MAEAQ7L5Y9 396 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 NOSTRINQ8IVI9 506 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 UBALD2Q8IYN6 164 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 TDRD5Q8NAT2 981 aaKnown RBP13.58□□□□□ -0.24
SPG11-219ENST00000559822 FBXL18Q96ME1 805 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 KLHL5Q96PQ7 755 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 RPS6KC1Q96S38 1066 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 COLEC11Q9BWP8 271 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 APOL6Q9BWW8 343 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 VN1R3Q9BXE9 311 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 RAB34Q9BZG1 259 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 NXF3Q9H4D5 531 aaKnown RBP13.58□□□□□ -0.24
SPG11-219ENST00000559822 SORCS3Q9UPU3 1222 aa13.58□□□□□ -0.24
SPG11-219ENST00000559822 KIF3AQ9Y496 699 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms