RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 CARNS1A5YM72 827 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 NT5C1B-RDH14C9J2C7 533 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 HIP1RO75146 1068 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 NPTXRO95502 500 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 GLP2RO95838 553 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 PRKCBP05771 671 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 MLH1P40692 756 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 NRIP1P48552 1158 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 SLC11A1P49279 550 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 ALDH7A1P49419 539 aaKnown RBP12.09□□□□□ -0.47
SPG11-216ENST00000559347 GRIN1Q05586 938 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 RNASELQ05823 741 aaKnown RBP12.09□□□□□ -0.47
SPG11-216ENST00000559347 DLX2Q07687 328 aaPredicted RBP12.09□□□□□ -0.47
SPG11-216ENST00000559347 ZRSR1Q15695 479 aaKnown RBP12.09□□□□□ -0.47
SPG11-216ENST00000559347 MAPK6Q16659 721 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 PLPP4Q5VZY2 271 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 PDE12Q6L8Q7 609 aaKnown RBP12.09□□□□□ -0.47
SPG11-216ENST00000559347 RINT1Q6NUQ1 792 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 EP400NLQ6ZTU2 488 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 CABP7Q86V35 215 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 ZNF280BQ86YH2 543 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 KCTD17Q8N5Z5 321 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 EFHBQ8N7U6 833 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 DEPTORQ8TB45 409 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 BCL7CQ8WUZ0 217 aaPredicted RBP12.09□□□□□ -0.47
SPG11-216ENST00000559347 TMEM169Q96HH4 297 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 IFT74Q96LB3 600 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 TCF25Q9BQ70 676 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 TRIM6Q9C030 488 aaPredicted RBP12.09□□□□□ -0.47
SPG11-216ENST00000559347 GBP3Q9H0R5 595 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 PDZD7Q9H5P4 517 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 IGFLR1Q9H665 355 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 ENTPD7Q9NQZ7 604 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 MTMR6Q9Y217 621 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 TRIOO75962 3097 aa12.09□□□□□ -0.47
SPG11-216ENST00000559347 ARL5CA6NH57 179 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 ACKR2O00590 384 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 N4BP3O15049 544 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 SLC26A4O43511 780 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 DDHD2O94830 711 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 POMCP01189 267 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 IL9P15248 144 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 GUCY2CP25092 1073 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 LONP1P36776 959 aaKnown RBP12.08□□□□□ -0.48
SPG11-216ENST00000559347 SCNN1GP51170 649 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 EFNA5P52803 228 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 SLC12A3P55017 1021 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 KRT17Q04695 432 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 ADAM15Q13444 863 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 PRPF4BQ13523 1007 aaKnown RBP12.08□□□□□ -0.48
SPG11-216ENST00000559347 PTPAQ15257 358 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 DUSP6Q16828 381 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 PTCRAQ6ISU1 281 aaPredicted RBP12.08□□□□□ -0.48
SPG11-216ENST00000559347 FAM173BQ6P4H8 233 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 C1orf186Q6ZWK4 172 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 RBM23Q86U06 439 aaKnown RBP12.08□□□□□ -0.48
SPG11-216ENST00000559347 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
SPG11-216ENST00000559347 LRRC15Q8TF66 581 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 IGSF21Q96ID5 467 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 CDK5RAP3Q96JB5 506 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 DRC1Q96MC2 740 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 ZFP42Q96MM3 310 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 PLIN2Q99541 437 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 TIPINQ9BVW5 301 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 APOL6Q9BWW8 343 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 ZBP1Q9H171 429 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 ARHGAP28Q9P2N2 729 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 PUF60Q9UHX1 559 aaKnown RBP12.08□□□□□ -0.48
SPG11-216ENST00000559347 CLIC4Q9Y696 253 aa12.08□□□□□ -0.48
SPG11-216ENST00000559347 VWA8A3KMH1 1905 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 FSD2A1L4K1 749 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 GRXCR2A6NFK2 248 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 HIDE1A8MVS5 230 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 TNFRSF10AO00220 468 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 STX6O43752 255 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 GALTP07902 379 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 LIG1P18858 919 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 AKAP5P24588 427 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 NPTX2P47972 431 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 NDUFV1P49821 464 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 PEX3P56589 373 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 DSC1Q08554 894 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 RAD51AP2Q09MP3 1159 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 DMP1Q13316 513 aaPredicted RBP12.07□□□□□ -0.48
SPG11-216ENST00000559347 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
SPG11-216ENST00000559347 PUS10Q3MIT2 529 aaKnown RBP12.07□□□□□ -0.48
SPG11-216ENST00000559347 EEF1DP3Q658K8 133 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 TMC7Q7Z402 723 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 HSCBQ8IWL3 235 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 VN1R2Q8NFZ6 395 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 MSLNLQ96KJ4 702 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 GAD1Q99259 594 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 CDCA3Q99618 268 aaPredicted RBP12.07□□□□□ -0.48
SPG11-216ENST00000559347 TMEM175Q9BSA9 504 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 VN1R3Q9BXE9 311 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 TLE6Q9H808 572 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms