RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 KLHL14Q9P2G3 628 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 ASH2LQ9UBL3 628 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 PLA2G2DQ9UNK4 145 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 ZKSCAN5Q9Y2L8 839 aa7.39□□□□□ -1.23
LRRC28-209ENST00000558861 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
LRRC28-209ENST00000558861 TCRBV5S2A0A599 114 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 SLC12A8A0AV02 714 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 MAFKO60675 156 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 ZBTB48P10074 688 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-209ENST00000558861 HSP90B1P14625 803 aaKnown RBP7.38□□□□□ -1.23
LRRC28-209ENST00000558861 CDK11BP21127 795 aaKnown RBP7.38□□□□□ -1.23
LRRC28-209ENST00000558861 IL2P60568 153 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 TUSC3Q13454 348 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 GRAPQ13588 217 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 STAT4Q14765 748 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 NR1I3Q14994 352 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 SART3Q15020 963 aaKnown RBP7.38□□□□□ -1.23
LRRC28-209ENST00000558861 SEC23AQ15436 765 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 CYP4F22Q6NT55 531 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 LMBR1LQ6UX01 489 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 OLFM4Q6UX06 510 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 IRF2BP1Q8IU81 584 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 ARRDC4Q8NCT1 418 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 GRAPLQ8TC17 118 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-209ENST00000558861 FAM168AQ92567 244 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 LIN37Q96GY3 246 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-209ENST00000558861 TTC1Q99614 292 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 C9orf78Q9NZ63 289 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-209ENST00000558861 LTBP1Q14766 1721 aa7.38□□□□□ -1.23
LRRC28-209ENST00000558861 DUOX1Q9NRD9 1551 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 IRS2Q9Y4H2 1338 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 ZNF503-AS2A6NEH8 195 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 SCDO00767 359 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 BBOX1O75936 387 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 GNAI3P08754 354 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 UBTFL1P0CB47 393 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-209ENST00000558861 MAPKAPK2P49137 400 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 RPS8P62241 208 aaKnown RBP7.37□□□□□ -1.23
LRRC28-209ENST00000558861 ARHGAP44Q17R89 818 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 CCDC152Q4G0S7 254 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 EP400NLQ6ZTU2 488 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-209ENST00000558861 ITPRIPQ8IWB1 547 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 FTSJ3Q8IY81 847 aaKnown RBP7.37□□□□□ -1.23
LRRC28-209ENST00000558861 PHOSPHO1Q8TCT1 267 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 CLEC4DQ8WXI8 215 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 ZNF622Q969S3 477 aaKnown RBP eCLIP7.37□□□□□ -1.23
LRRC28-209ENST00000558861 IFT22Q9H7X7 185 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 OXSMQ9NWU1 459 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 ATP6V0A2Q9Y487 856 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 ATP23Q9Y6H3 246 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 LRRC37AA6NMS7 1700 aa7.37□□□□□ -1.23
LRRC28-209ENST00000558861 TAF1P21675 1872 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 ARFGEF1Q9Y6D6 1849 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 PNMA6EA0A0J9YXQ4 647 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 NPHP1O15259 732 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 FKBP9O95302 570 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 GNAI2P04899 355 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 ALDH1B1P30837 517 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 YBX1P67809 324 aaKnown RBP7.36□□□□□ -1.23
LRRC28-209ENST00000558861 GRIN1Q05586 938 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 CEP85Q6P2H3 762 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 ZC3H14Q6PJT7 736 aaKnown RBP7.36□□□□□ -1.23
LRRC28-209ENST00000558861 MPZL3Q6UWV2 235 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 FKBP9P1Q75LS8 142 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 TMC6Q7Z403 805 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 ZNF605Q86T29 641 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 NLGN4XQ8N0W4 816 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-209ENST00000558861 SSH3Q8TE77 659 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 RPGRQ92834 1020 aaKnown RBP7.36□□□□□ -1.23
LRRC28-209ENST00000558861 TSPAN17Q96FV3 270 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 RBM17Q96I25 401 aaKnown RBP7.36□□□□□ -1.23
LRRC28-209ENST00000558861 RTFDC1Q9BY42 306 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-209ENST00000558861 SPTLC3Q9NUV7 552 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 DDX19BQ9UMR2 479 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 MYH3P11055 1940 aa7.36□□□□□ -1.23
LRRC28-209ENST00000558861 COL4A5P29400 1685 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 FAM90A27PA6NNH2 459 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 DVL2O14641 736 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 GPR39O43194 453 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 CPEP16870 476 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 PTPN1P18031 435 aaKnown RBP7.35□□□□□ -1.23
LRRC28-209ENST00000558861 VIPR1P32241 457 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 LSSP48449 732 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 IRAK1P51617 712 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 EPHA5P54756 1037 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 TMPRSS15P98073 1019 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 ZNF200P98182 395 aaPredicted RBP7.35□□□□□ -1.23
LRRC28-209ENST00000558861 ATG9AQ7Z3C6 839 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 SP8Q8IXZ3 490 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 VGLL2Q8N8G2 317 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 WDR66Q8TBY9 1149 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 PUS3Q9BZE2 481 aaKnown RBP7.35□□□□□ -1.23
LRRC28-209ENST00000558861 KCNK12Q9HB15 430 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 EMC7Q9NPA0 242 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 RIC8BQ9NVN3 520 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 APOBEC2Q9Y235 224 aaKnown RBP7.35□□□□□ -1.23
LRRC28-209ENST00000558861 RIPOR2Q9Y4F9 1068 aa7.35□□□□□ -1.23
LRRC28-209ENST00000558861 NUB1Q9Y5A7 615 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms