RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 MYBP10242 640 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 NCLP19338 710 aaKnown RBP13.85□□□□□ -0.19
SMAD3-208ENST00000558827 PPM1AP35813 382 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 MLH1P40692 756 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 SCNN1GP51170 649 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 PDIA5Q14554 519 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 KRT79Q5XKE5 535 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 KANK3Q6NY19 840 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-208ENST00000558827 ZBTB8OSQ8IWT0 167 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 IGSF22Q8N9C0 903 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 IGSF21Q96ID5 467 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 RUSC1Q9BVN2 902 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 CXCL16Q9H2A7 254 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 CDH22Q9UJ99 828 aa13.85□□□□□ -0.19
SMAD3-208ENST00000558827 C5orf42Q9H799 3197 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 C2orf71A6NGG8 1288 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 ARL5CA6NH57 179 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 PRKCBP05771 671 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 AXLP30530 894 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 OR1G1P47890 313 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 ATP2C1P98194 919 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-208ENST00000558827 RILPL1Q5EBL4 403 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 EEF1DP3Q658K8 133 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 FAM173BQ6P4H8 233 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 TAS1R1Q7RTX1 841 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 TMEM87AQ8NBN3 555 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 MSLNLQ96KJ4 702 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 PNMA5Q96PV4 448 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 VN1R3Q9BXE9 311 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 RAB34Q9BZG1 259 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 DNM3Q9UQ16 869 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 LZTS1Q9Y250 596 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 FAN1Q9Y2M0 1017 aa13.84□□□□□ -0.19
SMAD3-208ENST00000558827 NPHP3-ACAD11A0A0J9YXS1 232 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 C2CD2LO14523 706 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 NRP1O14786 923 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 CLASP2O75122 1294 aaKnown RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 HIP1RO75146 1068 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 EYA4O95677 639 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 ALDH2P05091 517 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 WEE2P0C1S8 567 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 SP100P23497 879 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 PEX3P56589 373 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 GRIN1Q05586 938 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 POU5F1BQ06416 359 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 SMAD4Q13485 552 aaKnown RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 PRPF4BQ13523 1007 aaKnown RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 DHX8Q14562 1220 aaKnown RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 SMC1AQ14683 1233 aaKnown RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 PUS10Q3MIT2 529 aaKnown RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 C12orf76Q8N812 135 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 MRPL43Q8N983 215 aaKnown RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 FEZF2Q8TBJ5 459 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 IFT74Q96LB3 600 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 FZD8Q9H461 694 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 PDZD7Q9H5P4 517 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 NGRNQ9NPE2 291 aaKnown RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 PRMT7Q9NVM4 692 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 SNTG2Q9NY99 539 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 GDAQ9Y2T3 454 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 USP15Q9Y4E8 981 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-208ENST00000558827 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
SMAD3-208ENST00000558827 A0A1B0GUA9 196 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 PRPHP41219 470 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 CEBPZQ03701 1054 aaKnown RBP13.82□□□□□ -0.2
SMAD3-208ENST00000558827 ZP2Q05996 745 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 CUL4AQ13619 759 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 SMAD2Q15796 467 aaKnown RBP13.82□□□□□ -0.2
SMAD3-208ENST00000558827 MAPK6Q16659 721 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 NT5DC1Q5TFE4 455 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 CDCA2Q69YH5 1023 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-208ENST00000558827 PDE12Q6L8Q7 609 aaKnown RBP13.82□□□□□ -0.2
SMAD3-208ENST00000558827 RINT1Q6NUQ1 792 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 SLC27A1Q6PCB7 646 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 CNNM3Q8NE01 707 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 CCDC51Q96ER9 411 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 B3GALT6Q96L58 329 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 ZBP1Q9H171 429 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 FAM50BQ9Y247 325 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 CNTNAP2Q9UHC6 1331 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 MUC3AQ02505 3323 aa13.82□□□□□ -0.2
SMAD3-208ENST00000558827 LAD1O00515 517 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 EPCAMP16422 314 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 NAMPTP43490 491 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 SF3A1Q15459 793 aaKnown RBP13.81□□□□□ -0.2
SMAD3-208ENST00000558827 SPECC1Q5M775 1068 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 ANKRD54Q6NXT1 300 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 SYCE2Q6PIF2 218 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 ZBTB33Q86T24 672 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 DDX53Q86TM3 631 aaKnown RBP13.81□□□□□ -0.2
SMAD3-208ENST00000558827 CABP7Q86V35 215 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 COLGALT2Q8IYK4 626 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 DAW1Q8N136 415 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 CDK5RAP3Q96JB5 506 aa13.81□□□□□ -0.2
SMAD3-208ENST00000558827 RPGRIP1Q96KN7 1286 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms