RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 DYNC1I1O14576 645 aa14.11□□□□□ -0.15
SMAD3-207ENST00000558763 SEPT4O43236 478 aa14.11□□□□□ -0.15
SMAD3-207ENST00000558763 MYCP01106 439 aaPredicted RBP14.11□□□□□ -0.15
SMAD3-207ENST00000558763 PPP3CAQ08209 521 aa14.11□□□□□ -0.15
SMAD3-207ENST00000558763 DRP2Q13474 957 aa14.11□□□□□ -0.15
SMAD3-207ENST00000558763 MAP3K21Q5TCX8 1036 aa14.11□□□□□ -0.15
SMAD3-207ENST00000558763 FAM160B1Q5W0V3 765 aa14.11□□□□□ -0.15
SMAD3-207ENST00000558763 INTS8Q75QN2 995 aaKnown RBP14.11□□□□□ -0.15
SMAD3-207ENST00000558763 RDH13Q8NBN7 331 aa14.11□□□□□ -0.15
SMAD3-207ENST00000558763 LRRN4CLQ8ND94 238 aa14.11□□□□□ -0.15
SMAD3-207ENST00000558763 OLIG1Q8TAK6 271 aa14.11□□□□□ -0.15
SMAD3-207ENST00000558763 MAFO75444 373 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-207ENST00000558763 EDN1P05305 212 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 RFC5P40937 340 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-207ENST00000558763 SLC9C1Q4G0N8 1177 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 ARHGAP29Q52LW3 1261 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 SFMBT2Q5VUG0 894 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 GJB7Q6PEY0 223 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 IRF2BP2Q7Z5L9 587 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 CTU1Q7Z7A3 348 aaKnown RBP14.1□□□□□ -0.15
SMAD3-207ENST00000558763 CBWD2Q8IUF1 395 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 PPTC7Q8NI37 304 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 EMID1Q96A84 441 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-207ENST00000558763 CCDC42Q96M95 316 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 ZNF215Q9UL58 517 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-207ENST00000558763 EXOC7Q9UPT5 735 aa14.1□□□□□ -0.15
SMAD3-207ENST00000558763 DNAH12Q6ZR08 3092 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 IGKV6-21A0A0C4DH24 114 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 SERPING1P05155 500 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 MMP3P08254 477 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 VAV2P52735 878 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 KRT83P78385 493 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 PLCB4Q15147 1175 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 IQCEQ6IPM2 695 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 PLPPR4Q7Z2D5 763 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 GPR88Q9GZN0 384 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 HAUS4Q9H6D7 363 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 MYO6Q9UM54 1294 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 EVPLQ92817 2033 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 MYH10P35580 1976 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 GOLGA8IPA6NC78 632 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 GOLGA8JA6NMD2 632 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 LRRN2O75325 713 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 ZNF286BP0CG31 522 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 RARBP10826 455 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 NAMPTP43490 491 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 VAMP7P51809 220 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 RAPGEF1Q13905 1077 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 SNRNP35Q16560 246 aaKnown RBP14.09□□□□□ -0.15
SMAD3-207ENST00000558763 BRDTQ58F21 947 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-207ENST00000558763 SLC35F6Q8N357 371 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 ATP8B4Q8TF62 1192 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 SLC7A3Q8WY07 619 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 BBXQ8WY36 941 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-207ENST00000558763 GLG1Q92896 1179 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 SAAL1Q96ER3 474 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 FAM167AQ96KS9 214 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 IFT74Q96LB3 600 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 HAPLN2Q9GZV7 340 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 AP5M1Q9H0R1 490 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 AZI2Q9H6S1 392 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 NRBP2Q9NSY0 501 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 MYO1AQ9UBC5 1043 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 STYXL1Q9Y6J8 313 aa14.09□□□□□ -0.15
SMAD3-207ENST00000558763 PMM2O15305 246 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 KIF5CO60282 957 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 DUSP11O75319 330 aaKnown RBP14.08□□□□□ -0.16
SMAD3-207ENST00000558763 PGK1P00558 417 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 PIGRP01833 764 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-207ENST00000558763 C6orf222P0C671 652 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-207ENST00000558763 MARK3P27448 753 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 PRKCIP41743 596 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 BEX3Q00994 111 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 MYL7Q01449 175 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 CAPSQ13938 189 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 NAA30Q147X3 362 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-207ENST00000558763 EPC2Q52LR7 807 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 ZNF569Q5MCW4 686 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 INTS2Q9H0H0 1204 aaKnown RBP14.08□□□□□ -0.16
SMAD3-207ENST00000558763 HMX1Q9NP08 348 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-207ENST00000558763 USP20Q9Y2K6 914 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 PPME1Q9Y570 386 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 MRFAP1Q9Y605 127 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 DUSP10Q9Y6W6 482 aa14.08□□□□□ -0.16
SMAD3-207ENST00000558763 MYADML2A6NDP7 307 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 HNRNPDLO14979 420 aaKnown RBP14.07□□□□□ -0.16
SMAD3-207ENST00000558763 LGALS2P05162 132 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 GARTP22102 1010 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 CASQ1P31415 396 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 GFPT1Q06210 699 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-207ENST00000558763 ZNF710Q8N1W2 664 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 JAKMIP2Q96AA8 810 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 MFSD14AQ96MC6 490 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 XPNPEP3Q9NQH7 507 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 DDX20Q9UHI6 824 aaKnown RBP14.07□□□□□ -0.16
SMAD3-207ENST00000558763 NENFQ9UMX5 172 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 GUCA1BQ9UMX6 200 aa14.07□□□□□ -0.16
SMAD3-207ENST00000558763 PCDHA13Q9Y5I0 950 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms