RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 CREG2Q8IUH2 290 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 FAM126BQ8IXS8 530 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 REPS2Q8NFH8 660 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 HERVK_113Q902F9 699 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 SLC38A3Q99624 504 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 SLF1Q9BQI6 1058 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 C1QTNF1Q9BXJ1 281 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 NKX2-4Q9H2Z4 354 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 ABHD16BQ9H3Z7 469 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 IL1RAPL2Q9NP60 686 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 KBTBD4Q9NVX7 518 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 GPATCH2Q9NW75 528 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 KLHL3Q9UH77 587 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 TMEM59LQ9UK28 342 aa7.18□□□□□ -1.26
ZEB1-211ENST00000558440 WDFY4Q6ZS81 3184 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 CYP2D7A0A087X1C5 515 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 DBX1A6NMT0 343 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 CHURC1-FNTBB4DL54 471 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 ZBED4O75132 1171 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 IFIT2P09913 472 aaKnown RBP7.17□□□□□ -1.26
ZEB1-211ENST00000558440 CCDC144BQ3MJ40 725 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 RALGPS1Q5JS13 557 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 C12orf60Q5U649 245 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 CEP85Q6P2H3 762 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 NOL8Q76FK4 1167 aaKnown RBP7.17□□□□□ -1.26
ZEB1-211ENST00000558440 TSPYL5Q86VY4 417 aaPredicted RBP7.17□□□□□ -1.26
ZEB1-211ENST00000558440 CPXCR1Q8N123 301 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 ANKRD35Q8N283 1001 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 CLASRPQ8N2M8 674 aaKnown RBP7.17□□□□□ -1.26
ZEB1-211ENST00000558440 PRPF38AQ8NAV1 312 aaKnown RBP7.17□□□□□ -1.26
ZEB1-211ENST00000558440 BHLHE22Q8NFJ8 381 aaPredicted RBP7.17□□□□□ -1.26
ZEB1-211ENST00000558440 TET1Q8NFU7 2136 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 FBXO27Q8NI29 283 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.17□□□□□ -1.26
ZEB1-211ENST00000558440 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.17□□□□□ -1.26
ZEB1-211ENST00000558440 BCL11AQ9H165 835 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 UPF3AQ9H1J1 476 aaKnown RBP7.17□□□□□ -1.26
ZEB1-211ENST00000558440 HIPK3Q9H422 1215 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 FBXO40Q9UH90 709 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 TANC1Q9C0D5 1861 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 LCTP09848 1927 aa7.17□□□□□ -1.26
ZEB1-211ENST00000558440 ADCY6O43306 1168 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 DNAJA2O60884 412 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 CABYRO75952 493 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 CD4P01730 458 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 ADD2P35612 726 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 BEX3Q00994 111 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 MPZL3Q6UWV2 235 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 ARMCX2Q7L311 632 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 OTOP2Q7RTS6 562 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 RPUSD2Q8IZ73 545 aaKnown RBP7.16□□□□□ -1.26
ZEB1-211ENST00000558440 BAHD1Q8TBE0 780 aaPredicted RBP7.16□□□□□ -1.26
ZEB1-211ENST00000558440 CCDC74BQ96LY2 380 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 KREMEN1Q96MU8 473 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 NUP88Q99567 741 aaPredicted RBP7.16□□□□□ -1.26
ZEB1-211ENST00000558440 ASPNQ9BXN1 380 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 LRRC3Q9BY71 257 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 SEZ6LQ9BYH1 1024 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 PAG1Q9NWQ8 432 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 DUSP13Q9UII6 198 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 YBX2Q9Y2T7 364 aaKnown RBP7.16□□□□□ -1.26
ZEB1-211ENST00000558440 RIPK3Q9Y572 518 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 PCDHA11Q9Y5I1 949 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 SLC4A7Q9Y6M7 1214 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 SLC4A4Q9Y6R1 1079 aa7.16□□□□□ -1.26
ZEB1-211ENST00000558440 PTPRSQ13332 1948 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 F5H6K3 240 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 SMIM22K7EJ46 135 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 ATP2A1O14983 1001 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 ZEB2O60315 1214 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 LRRN2O75325 713 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 NDUFB10O96000 172 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 RAC2P15153 192 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 RABGGTBP53611 331 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 CCL23P55773 120 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 TNFAIP2Q03169 654 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 TFF2Q03403 129 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 KLRC3Q07444 240 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 ITGA7Q13683 1181 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 FBLN7Q53RD9 439 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 ZSCAN25Q6NSZ9 544 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 FBXL19Q6PCT2 694 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 CTR9Q6PD62 1173 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 CXCL17Q6UXB2 119 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 PRR23BQ6ZRT6 265 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 CCDC144CPQ8IYA2 1237 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 PHACTR4Q8IZ21 702 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 CHST13Q8NET6 341 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 ABHD4Q8TB40 342 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 KIF1BPQ96EK5 621 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 AP5M1Q9H0R1 490 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 ADAMTS10Q9H324 1103 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 RAVER2Q9HCJ3 691 aaKnown RBP7.15□□□□□ -1.26
ZEB1-211ENST00000558440 HOMER2Q9NSB8 354 aa7.15□□□□□ -1.26
ZEB1-211ENST00000558440 ARPP21Q9UBL0 812 aaPredicted RBP7.15□□□□□ -1.26
ZEB1-211ENST00000558440 ISY1Q9ULR0 285 aaKnown RBP7.15□□□□□ -1.26
ZEB1-211ENST00000558440 COL4A4P53420 1690 aaPredicted RBP7.15□□□□□ -1.27
ZEB1-211ENST00000558440 MYH6P13533 1939 aa7.15□□□□□ -1.27
ZEB1-211ENST00000558440 SCN10AQ9Y5Y9 1956 aa7.15□□□□□ -1.27
ZEB1-211ENST00000558440 C5orf42Q9H799 3197 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms