RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 B4GALT6Q9UBX8 382 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 B3GALT1Q9Y5Z6 326 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 A0A0G2JLL6 359 aaPredicted RBP7.83□□□□□ -1.16
RTF1-204ENST00000558117 MROH6A6NGR9 719 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 DVL2O14641 736 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 CELF2O95319 508 aaKnown RBP7.83□□□□□ -1.16
RTF1-204ENST00000558117 MYCLP1P12525 358 aaPredicted RBP7.83□□□□□ -1.16
RTF1-204ENST00000558117 SMAD2Q15796 467 aaKnown RBP7.83□□□□□ -1.16
RTF1-204ENST00000558117 ARHGAP44Q17R89 818 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 BORAQ6PGQ7 559 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 LILRA6Q6PI73 481 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 NXPE1Q8N323 547 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 LCORQ96JN0 433 aaPredicted RBP7.83□□□□□ -1.16
RTF1-204ENST00000558117 TEPSINQ96N21 525 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 BOCQ9BWV1 1114 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 TMEM168Q9H0V1 697 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 ADAM7Q9H2U9 754 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 CABP5Q9NP86 173 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 STXBP5LQ9Y2K9 1186 aa7.83□□□□□ -1.16
RTF1-204ENST00000558117 C9orf118A6NHY6 69 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 ZNF891A8MT65 544 aaPredicted RBP7.82□□□□□ -1.16
RTF1-204ENST00000558117 GSG1L2A8MUP6 293 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 NOBOXO60393 691 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 RPS6KA4O75676 772 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 MLLT6P55198 1093 aaPredicted RBP7.82□□□□□ -1.16
RTF1-204ENST00000558117 HERVK_113P62684 666 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 TMEM132BQ14DG7 1078 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 SEPT7Q16181 437 aaKnown RBP7.82□□□□□ -1.16
RTF1-204ENST00000558117 C2CD5Q86YS7 1000 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 SYNE4Q8N205 404 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 ZCCHC14Q8WYQ9 949 aaKnown RBP7.82□□□□□ -1.16
RTF1-204ENST00000558117 ORAI3Q9BRQ5 295 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 KCNH7Q9NS40 1196 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 SRP68Q9UHB9 627 aaKnown RBP7.82□□□□□ -1.16
RTF1-204ENST00000558117 CENPFP49454 3210 aa7.82□□□□□ -1.16
RTF1-204ENST00000558117 FER1L6Q2WGJ9 1857 aa7.81□□□□□ -1.16
RTF1-204ENST00000558117 TRPM7Q96QT4 1865 aa7.81□□□□□ -1.16
RTF1-204ENST00000558117 PDE8AO60658 829 aa7.81□□□□□ -1.16
RTF1-204ENST00000558117 IL18BPO95998 194 aa7.81□□□□□ -1.16
RTF1-204ENST00000558117 CHGBP05060 677 aa7.81□□□□□ -1.16
RTF1-204ENST00000558117 EN2P19622 333 aaPredicted RBP7.81□□□□□ -1.16
RTF1-204ENST00000558117 MC4RP32245 332 aa7.81□□□□□ -1.16
RTF1-204ENST00000558117 KIF23Q02241 960 aaPredicted RBP7.81□□□□□ -1.16
RTF1-204ENST00000558117 UBXN11Q5T124 520 aa7.81□□□□□ -1.16
RTF1-204ENST00000558117 CREB3L3Q68CJ9 461 aa7.81□□□□□ -1.16
RTF1-204ENST00000558117 DPP8Q6V1X1 898 aaPredicted RBP7.81□□□□□ -1.16
RTF1-204ENST00000558117 STPG3Q8N7X2 389 aa7.81□□□□□ -1.16
RTF1-204ENST00000558117 YTHDC1Q96MU7 727 aaKnown RBP7.81□□□□□ -1.16
RTF1-204ENST00000558117 SMG6Q86US8 1419 aaKnown RBP7.8□□□□□ -1.16
RTF1-204ENST00000558117 F2P00734 622 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 MMEP08473 750 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 PTGS1P23219 599 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 AOAHP28039 575 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 THNSL2Q86YJ6 484 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 LGI4Q8N135 537 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 PPM1KQ8N3J5 372 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 WDR48Q8TAF3 677 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 C20orf173Q96LM9 149 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 TACO1Q9BSH4 297 aaKnown RBP7.8□□□□□ -1.16
RTF1-204ENST00000558117 SLKQ9H2G2 1235 aaPredicted RBP7.8□□□□□ -1.16
RTF1-204ENST00000558117 BARX1Q9HBU1 254 aaPredicted RBP7.8□□□□□ -1.16
RTF1-204ENST00000558117 KCND1Q9NSA2 647 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 H2AFY2Q9P0M6 372 aaPredicted RBP7.8□□□□□ -1.16
RTF1-204ENST00000558117 BTBD7Q9P203 1132 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 HDAC9Q9UKV0 1011 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 ASAP1Q9ULH1 1129 aa7.8□□□□□ -1.16
RTF1-204ENST00000558117 FAM208AQ9UK61 1670 aaKnown RBP7.79□□□□□ -1.16
RTF1-204ENST00000558117 TTC21AQ8NDW8 1320 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 USP42Q9H9J4 1324 aaKnown RBP7.79□□□□□ -1.16
RTF1-204ENST00000558117 DLEC1Q9Y238 1755 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 H0Y858 1186 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 H0YIN7 160 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 FOXP2O15409 715 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 CLSTN1O94985 981 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 ATP2A2P16615 1042 aaKnown RBP7.79□□□□□ -1.16
RTF1-204ENST00000558117 SDHAP31040 664 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 CNR2P34972 360 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 MASP1P48740 699 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 KIF11P52732 1056 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 CATSPEREQ5SY80 951 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 AHI1Q8N157 1196 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 HIPK4Q8NE63 616 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 ASB15Q8WXK1 588 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 RELTQ969Z4 430 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 LTV1Q96GA3 475 aaPredicted RBP7.79□□□□□ -1.16
RTF1-204ENST00000558117 INCENPQ9NQS7 918 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 UCKL1Q9NWZ5 548 aa7.79□□□□□ -1.16
RTF1-204ENST00000558117 CGNL1Q0VF96 1302 aa7.78□□□□□ -1.16
RTF1-204ENST00000558117 CYP27B1O15528 508 aa7.78□□□□□ -1.16
RTF1-204ENST00000558117 SLC9A1P19634 815 aa7.78□□□□□ -1.16
RTF1-204ENST00000558117 DSG1Q02413 1049 aa7.78□□□□□ -1.16
RTF1-204ENST00000558117 CC2D1AQ6P1N0 951 aaPredicted RBP7.78□□□□□ -1.16
RTF1-204ENST00000558117 PLEKHH3Q7Z736 793 aa7.78□□□□□ -1.16
RTF1-204ENST00000558117 KIF18BQ86Y91 864 aa7.78□□□□□ -1.16
RTF1-204ENST00000558117 KLHL36Q8N4N3 616 aa7.78□□□□□ -1.16
RTF1-204ENST00000558117 UBR7Q8N806 425 aa7.78□□□□□ -1.16
RTF1-204ENST00000558117 LEO1Q8WVC0 666 aaPredicted RBP7.78□□□□□ -1.16
RTF1-204ENST00000558117 IP6K1Q92551 441 aa7.78□□□□□ -1.16
RTF1-204ENST00000558117 GBP4Q96PP9 640 aa7.78□□□□□ -1.16
RTF1-204ENST00000558117 PCIF1Q9H4Z3 704 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms