RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 SMC3Q9UQE7 1217 aa12.68□□□□□ -0.38
LINC00648-204ENST00000557749 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.67□□□□□ -0.38
LINC00648-204ENST00000557749 TMEM150BA6NC51 233 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 BMP15O95972 392 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 LINC00271P0C7V0 271 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 PDCP20941 246 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 GGCXP38435 758 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 PRPHP41219 470 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 ALDH7A1P49419 539 aaKnown RBP12.67□□□□□ -0.38
LINC00648-204ENST00000557749 RARRES1P49788 294 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 DRP2Q13474 957 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 COL19A1Q14993 1142 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 PPP2R5AQ15172 486 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 NOTUMQ6P988 496 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 KLHL23Q8NBE8 558 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 RNF149Q8NC42 400 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 URGCPQ8TCY9 931 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 IFT122Q9HBG6 1241 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 PRDM6Q9NQX0 595 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 FAM105AQ9NUU6 356 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 WRAP73Q9P2S5 460 aaPredicted RBP12.67□□□□□ -0.38
LINC00648-204ENST00000557749 KCNG1Q9UIX4 513 aa12.67□□□□□ -0.38
LINC00648-204ENST00000557749 EYSQ5T1H1 3165 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 ARHGEF35A5YM69 484 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 GRM6O15303 877 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 SRGAP2CP0DJJ0 459 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 FGFR1P11362 822 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 KCNA5P22460 613 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 TECP42680 631 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 PLCB3Q01970 1234 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 ZNF174Q15697 407 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 TCEAL5Q5H9L2 206 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 FAM102BQ5T8I3 360 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 KRT79Q5XKE5 535 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 MCTP1Q6DN14 999 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 APBB1IPQ7Z5R6 666 aaPredicted RBP12.66□□□□□ -0.38
LINC00648-204ENST00000557749 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
LINC00648-204ENST00000557749 ZBTB8OSQ8IWT0 167 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 COLGALT1Q8NBJ5 622 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 RNF169Q8NCN4 708 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 POF1BQ8WVV4 589 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 TMEM143Q96AN5 459 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 PRIMPOLQ96LW4 560 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 SH2D3AQ9BRG2 576 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 C2orf40Q9H1Z8 148 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 NGRNQ9NPE2 291 aaKnown RBP12.66□□□□□ -0.38
LINC00648-204ENST00000557749 TLR9Q9NR96 1032 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 TYW1Q9NV66 732 aaKnown RBP12.66□□□□□ -0.38
LINC00648-204ENST00000557749 LRWD1Q9UFC0 647 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 A0A0C4DFX4 3053 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 ZMYM2Q9UBW7 1377 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 NCOR1O75376 2440 aa12.66□□□□□ -0.38
LINC00648-204ENST00000557749 FNDC1Q4ZHG4 1894 aaPredicted RBP12.65□□□□□ -0.38
LINC00648-204ENST00000557749 PRUNE2Q8WUY3 3088 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 ARID2Q68CP9 1835 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 TTC28Q96AY4 2481 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 INO80B-WBP1J3KQ70 363 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 SLC26A4O43511 780 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 FGF18O76093 207 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 ITGB1P05556 798 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 BMP1P13497 986 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 PTENP60484 403 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 TFF2Q03403 129 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 GIT2Q14161 759 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 PTPRNQ16849 979 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 DTHD1Q6ZMT9 781 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 CATSPER3Q86XQ3 398 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 SPPL3Q8TCT6 385 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 MRPS27Q92552 414 aaKnown RBP12.65□□□□□ -0.38
LINC00648-204ENST00000557749 ZNF668Q96K58 619 aaPredicted RBP12.65□□□□□ -0.38
LINC00648-204ENST00000557749 CASD1Q96PB1 797 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
LINC00648-204ENST00000557749 TMEM60Q9H2L4 133 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 ALG13Q9NP73 1137 aaKnown RBP12.65□□□□□ -0.38
LINC00648-204ENST00000557749 EVA1BQ9NVM1 165 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 SPG21Q9NZD8 308 aa12.65□□□□□ -0.38
LINC00648-204ENST00000557749 USO1O60763 962 aaKnown RBP12.64□□□□□ -0.39
LINC00648-204ENST00000557749 DTNBO60941 627 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 F12P00748 615 aaPredicted RBP12.64□□□□□ -0.39
LINC00648-204ENST00000557749 GJB2P29033 226 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 ARL2P36404 184 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 CCT6AP40227 531 aaKnown RBP12.64□□□□□ -0.39
LINC00648-204ENST00000557749 RNASELQ05823 741 aaKnown RBP12.64□□□□□ -0.39
LINC00648-204ENST00000557749 NOMO2Q5JPE7 1267 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 ARL6IP4Q66PJ3 421 aaKnown RBP12.64□□□□□ -0.39
LINC00648-204ENST00000557749 KCNT2Q6UVM3 1135 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 BRAPQ7Z569 592 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 KSR1Q8IVT5 923 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 KIFAP3Q92845 792 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 TMEM169Q96HH4 297 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 IFT74Q96LB3 600 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 POP1Q99575 1024 aaKnown RBP12.64□□□□□ -0.39
LINC00648-204ENST00000557749 TIPINQ9BVW5 301 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 PRMT7Q9NVM4 692 aaPredicted RBP12.64□□□□□ -0.39
LINC00648-204ENST00000557749 CLDND1Q9NY35 253 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 PRKAG3Q9UGI9 489 aa12.64□□□□□ -0.39
LINC00648-204ENST00000557749 PCDHB2Q9Y5E7 798 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms