RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 KIF5BP33176 963 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 CXCL12P48061 93 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 CCR3P51677 355 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 SATB1Q01826 763 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 DRP2Q13474 957 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 GAS6Q14393 721 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 PPP2R5DQ14738 602 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 SOWAHCQ53LP3 525 aaPredicted RBP11.33□□□□□ -0.6
ABCD4-227ENST00000557554 CWC27Q6UX04 472 aaKnown RBP11.33□□□□□ -0.6
ABCD4-227ENST00000557554 TRMT1LQ7Z2T5 733 aaKnown RBP11.33□□□□□ -0.6
ABCD4-227ENST00000557554 CKAP2LQ8IYA6 745 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 SRBD1Q8N5C6 995 aaKnown RBP11.33□□□□□ -0.6
ABCD4-227ENST00000557554 IGDCC4Q8TDY8 1250 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 PHF20Q9BVI0 1012 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 LNPKQ9C0E8 428 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 CEP131Q9UPN4 1083 aa11.33□□□□□ -0.6
ABCD4-227ENST00000557554 IGSF10Q6WRI0 2623 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 CHURC1-FNTBB4DL54 471 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 F8W810 466 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 ZNF862O60290 1169 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 ECI2O75521 394 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 ZIC2O95409 532 aaPredicted RBP11.32□□□□□ -0.6
ABCD4-227ENST00000557554 TOP3BO95985 862 aaKnown RBP11.32□□□□□ -0.6
ABCD4-227ENST00000557554 SPINK2P20155 84 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 FNTBP49356 437 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 RAB27AP51159 221 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
ABCD4-227ENST00000557554 PLA2G2CQ5R387 149 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 TWF2Q6IBS0 349 aaKnown RBP11.32□□□□□ -0.6
ABCD4-227ENST00000557554 PSAPL1Q6NUJ1 521 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 NIPA1Q7RTP0 329 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.32□□□□□ -0.6
ABCD4-227ENST00000557554 B3GALT6Q96L58 329 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 GCOM2Q9BZD3 368 aaPredicted RBP11.32□□□□□ -0.6
ABCD4-227ENST00000557554 LMAN1LQ9HAT1 526 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 SEC63Q9UGP8 760 aaKnown RBP11.32□□□□□ -0.6
ABCD4-227ENST00000557554 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 MAST4O15021 2626 aa11.32□□□□□ -0.6
ABCD4-227ENST00000557554 ADAMTS20P59510 1910 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 SPAG17Q6Q759 2223 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 IGLV3-22A0A075B6J6 115 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 FAM86B1E9PN63 330 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 MAN2B1O00754 1011 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 GIPC1O14908 333 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 PAPSS2O95340 614 aaPredicted RBP11.31□□□□□ -0.6
ABCD4-227ENST00000557554 POMCP01189 267 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 HNRNPA1P09651 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
ABCD4-227ENST00000557554 FAM86B2P0C5J1 330 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 CHRNB1P11230 501 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 RAP1GAPP47736 663 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 DSC1Q08554 894 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 TARBP2Q15633 366 aaKnown RBP11.31□□□□□ -0.6
ABCD4-227ENST00000557554 LONP2Q86WA8 852 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 NPAS3Q8IXF0 933 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 CMTR1Q8N1G2 835 aaKnown RBP11.31□□□□□ -0.6
ABCD4-227ENST00000557554 URGCPQ8TCY9 931 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 NLRP7Q8WX94 980 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 CRYGNQ8WXF5 182 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 PGBD4Q96DM1 585 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 CEP89Q96ST8 783 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 ADAM33Q9BZ11 813 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 GPR62Q9BZJ7 368 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.31□□□□□ -0.6
ABCD4-227ENST00000557554 NDRG2Q9UN36 371 aaKnown RBP11.31□□□□□ -0.6
ABCD4-227ENST00000557554 PCDHA10Q9Y5I2 948 aa11.31□□□□□ -0.6
ABCD4-227ENST00000557554 COL4A2P08572 1712 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 A0A087WZ62 844 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 IPO5O00410 1097 aaKnown RBP11.3□□□□□ -0.6
ABCD4-227ENST00000557554 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 RPL17P18621 184 aaKnown RBP11.3□□□□□ -0.6
ABCD4-227ENST00000557554 HOXA6P31267 233 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 HOXC13P31276 330 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 ANTXR2P58335 489 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 CDC42EP1Q00587 391 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 CCDC6Q16204 474 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 UBXN11Q5T124 520 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 ZNF746Q6NUN9 644 aaPredicted RBP11.3□□□□□ -0.6
ABCD4-227ENST00000557554 CATIPQ7Z7H3 387 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 GLYCTKQ8IVS8 523 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 SPEM1Q8N4L4 309 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 DNASE1L2Q92874 299 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 LOXL4Q96JB6 756 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 FAM193BQ96PV7 902 aaPredicted RBP11.3□□□□□ -0.6
ABCD4-227ENST00000557554 LZTS2Q9BRK4 669 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 FDXACB1Q9BRP7 624 aaPredicted RBP11.3□□□□□ -0.6
ABCD4-227ENST00000557554 ARRDC1-AS1Q9H2J1 176 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 RSAD1Q9HA92 442 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 MIOSQ9NXC5 875 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 GABBR1Q9UBS5 961 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 FBXW11Q9UKB1 542 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 KCNH3Q9ULD8 1083 aa11.3□□□□□ -0.6
ABCD4-227ENST00000557554 PIN4Q9Y237 131 aaKnown RBP11.3□□□□□ -0.6
ABCD4-227ENST00000557554 PRG3Q9Y2Y8 225 aaPredicted RBP11.3□□□□□ -0.6
ABCD4-227ENST00000557554 IGKV6-21A0A0C4DH24 114 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 hCG_1642624A0A1W2PR95 340 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
ABCD4-227ENST00000557554 AXIN1O15169 862 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 CAPNS1P04632 268 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 PSAPP07602 524 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms