RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-215	ENST00000557517	INPPL1	O15357	1258 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	NCL	P19338	710 aa	Known RBP	11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	ATP2B1	P20020	1258 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	GLRA2	P23416	452 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	RPA1	P27694	616 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	TEC	P42680	631 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	PDIA5	Q14554	519 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	CLUL1	Q15846	466 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	AMHR2	Q16671	573 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	HFE2	Q6ZVN8	426 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	TMC7	Q7Z402	723 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	SMG8	Q8ND04	991 aa	Known RBP	11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	SUSD6	Q92537	303 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	IGSF21	Q96ID5	467 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	NACC1	Q96RE7	527 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	UBN1	Q9NPG3	1134 aa		11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	DBR1	Q9UK59	544 aa	Known RBP	11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.77	□□□□□ -0.53
PSMC6-215	ENST00000557517	ATG2A	Q2TAZ0	1938 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517		A0A1B0GUA9	196 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	C2orf71	A6NGG8	1288 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	NT5C1B-RDH14	C9J2C7	533 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	ARHGAP33	O14559	1287 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	TSPAN1	O60635	241 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	MED24	O75448	989 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	DDHD2	O94830	711 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	ALDH2	P05091	517 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	HOXB8	P17481	243 aa	Predicted RBP	11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	MUT	P22033	750 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	TOB1	P50616	345 aa	Predicted RBP	11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	AFF1	P51825	1210 aa	Known RBP	11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	FOSB	P53539	338 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	RBM10	P98175	930 aa	Known RBP	11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	MBTD1	Q05BQ5	628 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	NCBP1	Q09161	790 aa	Known RBP	11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	TFDP1	Q14186	410 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	CBX2	Q14781	532 aa	Predicted RBP	11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	ZNF174	Q15697	407 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	LONRF3	Q496Y0	759 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	DDX53	Q86TM3	631 aa	Known RBP	11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	TMEM173	Q86WV6	379 aa	Predicted RBP	11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	ZNF280B	Q86YH2	543 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	ASAP3	Q8TDY4	903 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	CCDC51	Q96ER9	411 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	POP1	Q99575	1024 aa	Known RBP	11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	CSRNP2	Q9H175	543 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	NLRC5	Q86WI3	1866 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	FAM186A	A6NE01	2351 aa		11.76	□□□□□ -0.53
PSMC6-215	ENST00000557517	LOC730098	B7Z3J9	87 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	CXCL14	O95715	111 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	OR52Z1	P0C646	297 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	CAPS	Q13938	189 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	GIT2	Q14161	759 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	SMC1A	Q14683	1233 aa	Known RBP	11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	BMS1	Q14692	1282 aa	Known RBP	11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	RABEP1	Q15276	862 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	TTC38	Q5R3I4	469 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	PLPP4	Q5VZY2	271 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	ANKRD54	Q6NXT1	300 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	NOTUM	Q6P988	496 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	SYCE2	Q6PIF2	218 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	VPS52	Q8N1B4	723 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	FAM184A	Q8NB25	1140 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	TMEM169	Q96HH4	297 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	MFSD14A	Q96MC6	490 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	TMEM175	Q9BSA9	504 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	FZD8	Q9H461	694 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	RSAD1	Q9HA92	442 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	ENTPD7	Q9NQZ7	604 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	DNAJB4	Q9UDY4	337 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	STK39	Q9UEW8	545 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	USP15	Q9Y4E8	981 aa	Predicted RBP	11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	CNTNAP2	Q9UHC6	1331 aa		11.75	□□□□□ -0.53
PSMC6-215	ENST00000557517	RALGAPA2	Q2PPJ7	1873 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	CFAP54	Q96N23	3096 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	USP34	Q70CQ2	3546 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	INO80B-WBP1	J3KQ70	363 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	B4GALT3	O60512	393 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	LILRB3	O75022	631 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	ERLIN2	O94905	339 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	EFEMP2	O95967	443 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	CTSA	P10619	480 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	ARF4	P18085	180 aa	Predicted RBP	11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	CYP11B2	P19099	503 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	SLC11A1	P49279	550 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	RNF135	Q8IUD6	432 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	IGSF22	Q8N9C0	903 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	GSTCD	Q8NEC7	633 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	MCPH1	Q8NEM0	835 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	ERMN	Q8TAM6	284 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	PTCD2	Q8WV60	388 aa	Known RBP	11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	PHOX2B	Q99453	314 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	PHF7	Q9BWX1	381 aa	Predicted RBP	11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	EIF2A	Q9BY44	585 aa	Known RBP	11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	ZBP1	Q9H171	429 aa		11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	DAXX	Q9UER7	740 aa	Predicted RBP	11.74	□□□□□ -0.53
PSMC6-215	ENST00000557517	INPP5F	Q9Y2H2	1132 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms